RNA–Protein interactions for RNA: ENST00000584450.5

ERBB2-218, Transcript of erb-b2 receptor tyrosine kinase 2, humanhuman

TSL 1 (best) BASIC

Gene ERBB2, Length 3,730 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ERBB2-218ENST00000584450 SETD1AO15047 1707 aaKnown RBP13.14□□□□□ -0.31
ERBB2-218ENST00000584450 CCDC151A5D8V7 595 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 SLC37A4O43826 429 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 CFAP221Q4G0U5 840 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 RCSD1Q6JBY9 416 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 PCDHA13Q9Y5I0 950 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 KIF13AQ9H1H9 1805 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 NEFHP12036 1026 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 KRT5P13647 590 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 ERVK-24P63145 666 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 DAAM2Q86T65 1068 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 NOA1Q8NC60 698 aaKnown RBP13.14□□□□□ -0.31
ERBB2-218ENST00000584450 RGL1Q9NZL6 768 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 STK17AQ9UEE5 414 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 KDM3AQ9Y4C1 1321 aa13.14□□□□□ -0.31
ERBB2-218ENST00000584450 VSNL1P62760 191 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 CASP8Q14790 479 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 UNC13DQ70J99 1090 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 KRT12Q99456 494 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 DDX52Q9Y2R4 599 aaKnown RBP eCLIP13.13□□□□□ -0.31
ERBB2-218ENST00000584450 ESYT3A0FGR9 886 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 ADAMTS3O15072 1205 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 MAP3K9P80192 1104 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 TUBB2AQ13885 445 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 NFRKBQ6P4R8 1299 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 TMED8Q6PL24 325 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-218ENST00000584450 DPH6Q7L8W6 267 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 PROCA1Q8NCQ7 364 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-218ENST00000584450 TUBB2BQ9BVA1 445 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 CCSER1Q9C0I3 900 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 DPH5Q9H2P9 285 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 CTTNBP2NLQ9P2B4 639 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 HYOU1Q9Y4L1 999 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 ZNF18P17022 549 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 TNNC1P63316 161 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 MDM2Q00987 491 aaPredicted RBP13.13□□□□□ -0.31
ERBB2-218ENST00000584450 COASYQ13057 564 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 GLT8D2Q9H1C3 349 aa13.13□□□□□ -0.31
ERBB2-218ENST00000584450 LIMA1Q9UHB6 759 aaKnown RBP13.13□□□□□ -0.31
ERBB2-218ENST00000584450 GCOM1H8Y6P7 765 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-218ENST00000584450 GFPT2O94808 682 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 POLR2MP0CAP2 368 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 STAT1P42224 750 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 ARHGAP4P98171 946 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SFR1Q86XK3 245 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 NAP1L4Q99733 375 aaKnown RBP13.12□□□□□ -0.31
ERBB2-218ENST00000584450 FAM204AQ9H8W3 233 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SWAP70Q9UH65 585 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 OPA1O60313 960 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 ZSCAN20P17040 1043 aaPredicted RBP13.12□□□□□ -0.31
ERBB2-218ENST00000584450 BIRC3Q13489 604 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 VPS72Q15906 364 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SCLT1Q96NL6 688 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SLIT3O75094 1523 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 FLOT1O75955 427 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 ABL1P00519 1130 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SARSP49591 514 aaKnown RBP13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SLC10A5Q5PT55 438 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 CDC42EP5Q6NZY7 148 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 KSR1Q8IVT5 923 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SLFN12Q8IYM2 578 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 RAD54LQ92698 747 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 SPZ1Q9BXG8 430 aa13.12□□□□□ -0.31
ERBB2-218ENST00000584450 HGSO14964 777 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 SPOPO43791 374 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 TUBBP07437 444 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 TUBB4BP68371 445 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 RC3H1Q5TC82 1133 aaKnown RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 SYDE2Q5VT97 1194 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 PDXDC2PQ6P474 469 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 TRIM65Q6PJ69 517 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 BARGINQ6ZT62 677 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 C16orf86Q6ZW13 317 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 MIER3Q7Z3K6 550 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 PHLDB2Q86SQ0 1253 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 DNAAF5Q86Y56 855 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 MMS19Q96T76 1030 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 ZMYND12Q9H0C1 365 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 EPB41L5Q9HCM4 733 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 CCPG1Q9ULG6 757 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 ZBTB12Q9Y330 459 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 MORC2Q9Y6X9 1032 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 GOLGA6L10A0A0M3HER8 536 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 K7ENM7 598 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 CCDC172P0C7W6 258 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 NPR1P16066 1061 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 ZNF543Q08ER8 600 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 TRAF1Q13077 416 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 FAM83BQ5T0W9 1011 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 CC2D2BQ6DHV5 1058 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 LMBR1Q8WVP7 490 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 RIN2Q8WYP3 895 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 JMJD4Q9H9V9 463 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 MAGEF1Q9HAY2 307 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 KCNQ5Q9NR82 932 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 EHD2Q9NZN4 543 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 RGPD1P0DJD0 1748 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 GPR75-ASB3A0A0A6YYF3 556 aa13.11□□□□□ -0.31
ERBB2-218ENST00000584450 PALM3A6NDB9 673 aaPredicted RBP13.11□□□□□ -0.31
ERBB2-218ENST00000584450 GBP6Q6ZN66 633 aa13.11□□□□□ -0.31
Retrieved 100 of 20,778 RNA–protein pairs in 17.5 ms