RNA–Protein interactions for RNA: ENST00000583908.1

NARF-222, Transcript of nuclear prelamin A recognition factor, human

TSL 3

Gene NARF, Length 430 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
NARF-222	ENST00000583908	MTG1	Q9BT17	334 aa	Predicted RBP	11.3	□□□□□ -0.6
NARF-222	ENST00000583908	PCDHA4	Q9UN74	947 aa		11.3	□□□□□ -0.6
NARF-222	ENST00000583908	ATP11B	Q9Y2G3	1177 aa		11.3	□□□□□ -0.6
NARF-222	ENST00000583908		A6NJR5	290 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	DCDC2C	A8MYV0	355 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	ADCY6	O43306	1168 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	GGPS1	O95749	300 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	MYL3	P08590	195 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	UBA1	P22314	1058 aa	Known RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	CLK2	P49760	499 aa	Known RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	MNX1	P50219	401 aa	Predicted RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	RTP1	P59025	263 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	BEX3	Q00994	111 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	SAFB	Q15424	915 aa	Known RBP eCLIP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	LY6K	Q17RY6	165 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	JAKMIP3	Q5VZ66	844 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	TYW1B	Q6NUM6	668 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	CCDC62	Q6P9F0	684 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	METTL7B	Q6UX53	244 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	SLC39A5	Q6ZMH5	540 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	NIPA1	Q7RTP0	329 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	BLID	Q8IZY5	108 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	DAGLB	Q8NCG7	672 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	IL31RA	Q8NI17	732 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	SPATA33	Q96N06	139 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	NAP1L4	Q99733	375 aa	Known RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	SENP7	Q9BQF6	1050 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	SDF4	Q9BRK5	362 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	ALG1	Q9BT22	464 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	BACH2	Q9BYV9	841 aa		11.29	□□□□□ -0.6
NARF-222	ENST00000583908	DDX41	Q9UJV9	622 aa	Known RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	DDX49	Q9Y6V7	483 aa	Known RBP	11.29	□□□□□ -0.6
NARF-222	ENST00000583908	CCDC194	A0A1B0GVG4	234 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	MYADML2	A6NDP7	307 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	SPATA31C2	B4DYI2	1134 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	ARIH2	O95376	493 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	MMP3	P08254	477 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	MRPS9	P82933	396 aa	Known RBP	11.28	□□□□□ -0.6
NARF-222	ENST00000583908	ARHGAP4	P98171	946 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	ARHGAP1	Q07960	439 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	SNX17	Q15036	470 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	LRRC26	Q2I0M4	334 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	CEP55	Q53EZ4	464 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	CELF3	Q5SZQ8	465 aa	Known RBP	11.28	□□□□□ -0.6
NARF-222	ENST00000583908	CCSAP	Q6IQ19	270 aa	Predicted RBP	11.28	□□□□□ -0.6
NARF-222	ENST00000583908	CXCL17	Q6UXB2	119 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	KRT25	Q7Z3Z0	450 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	CCDC83	Q8IWF9	413 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	NECAB1	Q8N987	351 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	LBHD1	Q9BQE6	289 aa	Predicted RBP	11.28	□□□□□ -0.6
NARF-222	ENST00000583908	JADE2	Q9NQC1	790 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	RTEL1	Q9NZ71	1219 aa		11.28	□□□□□ -0.6
NARF-222	ENST00000583908	ZNF215	Q9UL58	517 aa	Predicted RBP	11.28	□□□□□ -0.6
NARF-222	ENST00000583908	KIAA1217	Q5T5P2	1943 aa		11.27	□□□□□ -0.6
NARF-222	ENST00000583908	ARVCF	O00192	962 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	PQBP1	O60828	265 aa	Known RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	PPFIA3	O75145	1194 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	SUPT20HL2	P0C7V6	817 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	KRT2	P35908	639 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	PURA	Q00577	322 aa	Known RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	PTPN11	Q06124	597 aa	Predicted RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	ITGA7	Q13683	1181 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	GNL2	Q13823	731 aa	Known RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	NONO	Q15233	471 aa	Known RBP eCLIP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	TRIM60	Q495X7	471 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	NSUN7	Q8NE18	718 aa	Known RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	AFG1L	Q8WV93	481 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	TNPO1	Q92973	898 aa	Known RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	TOX2	Q96NM4	488 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	MXRA8	Q9BRK3	442 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	PRDM5	Q9NQX1	630 aa	Predicted RBP	11.27	□□□□□ -0.61
NARF-222	ENST00000583908	NOD1	Q9Y239	953 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	UBIAD1	Q9Y5Z9	338 aa		11.27	□□□□□ -0.61
NARF-222	ENST00000583908	CTAGE5	O15320	804 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	PPFIA4	O75335	1185 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	RGS20	O76081	388 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	LARGE1	O95461	756 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	CYP3A4	P08684	503 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	CLTB	P09497	229 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	USP11	P51784	963 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	FAM47C	Q5HY64	1035 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	MYSM1	Q5VVJ2	828 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	NFRKB	Q6P4R8	1299 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	ANKRD33	Q7Z3H0	272 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	CCDC155	Q8N6L0	562 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	COPS5	Q92905	334 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	PGBD1	Q96JS3	809 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	KIF2C	Q99661	725 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	PHF20	Q9BVI0	1012 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	JPH1	Q9HDC5	661 aa	Predicted RBP	11.26	□□□□□ -0.61
NARF-222	ENST00000583908	TMEM260	Q9NX78	707 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	ZSCAN21	Q9Y5A6	473 aa	Predicted RBP	11.26	□□□□□ -0.61
NARF-222	ENST00000583908	PDE4DIP	Q5VU43	2346 aa		11.26	□□□□□ -0.61
NARF-222	ENST00000583908	F2	P00734	622 aa		11.25	□□□□□ -0.61
NARF-222	ENST00000583908	GCFC2	P16383	781 aa	Known RBP	11.25	□□□□□ -0.61
NARF-222	ENST00000583908	ITGB5	P18084	799 aa		11.25	□□□□□ -0.61
NARF-222	ENST00000583908	CYFIP1	Q7L576	1253 aa		11.25	□□□□□ -0.61
NARF-222	ENST00000583908	PLA2G4D	Q86XP0	818 aa		11.25	□□□□□ -0.61
NARF-222	ENST00000583908	C7orf31	Q8N865	590 aa		11.25	□□□□□ -0.61
NARF-222	ENST00000583908	C8orf76	Q96K31	380 aa		11.25	□□□□□ -0.61

Retrieved 100 of 20,778 RNA–protein pairs in 32 ms