RNA–Protein interactions for RNA: ENST00000582955.5

SMARCE1-218, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 621 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-218ENST00000582955 ITGA7Q13683 1181 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 LAMC2Q13753 1193 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 NLRX1Q86UT6 975 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 TEX2Q8IWB9 1127 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 CCDC148Q8NFR7 591 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 LBHD1Q9BQE6 289 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 MTG1Q9BT17 334 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 ANO3Q9BYT9 981 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 C22orf23Q9BZE7 217 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 PDLIM7Q9NR12 457 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 TMEM260Q9NX78 707 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 VPS54Q9P1Q0 977 aa14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 COLQQ9Y215 455 aaPredicted RBP14.43□□□□□ -0.1
SMARCE1-218ENST00000582955 ESYT2A0FGR8 921 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 TLR3O15455 904 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 PFKFB2O60825 505 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 CDKL5O76039 1030 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 DEXIO95424 95 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 GNA11P29992 359 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 ICAM3P32942 547 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 MAGEA10P43363 369 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 MDM2Q00987 491 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 SP2Q02086 613 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 AP3B2Q13367 1082 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 CELF3Q5SZQ8 465 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 JAKMIP3Q5VZ66 844 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 ANKRD33Q7Z3H0 272 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 SH3RF1Q7Z6J0 888 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 EMID1Q96A84 441 aaPredicted RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 ZMYND12Q9H0C1 365 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 MLXIPQ9HAP2 919 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 UPF2Q9HAU5 1272 aaKnown RBP14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 TMEM39AQ9NV64 488 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 GTF3C3Q9Y5Q9 886 aa14.42□□□□□ -0.1
SMARCE1-218ENST00000582955 SPATA31C2B4DYI2 1134 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 CLK2P49760 499 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 CDK7P50613 346 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 NLRP5P59047 1200 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 FAAP100Q0VG06 881 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 SEMA3FQ13275 785 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 DGKDQ16760 1214 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 FAM47CQ5HY64 1035 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 MYSM1Q5VVJ2 828 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 REXO1Q8N1G1 1221 aaKnown RBP14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 NECAB1Q8N987 351 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 PPTC7Q8NI37 304 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 BICD2Q8TD16 824 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 SPATA33Q96N06 139 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 TOX2Q96NM4 488 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 GRIN2DO15399 1336 aa14.41□□□□□ -0.1
SMARCE1-218ENST00000582955 TRIM43BA6NCK2 446 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 NOP56O00567 594 aaKnown RBP14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 LARGE1O95461 756 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 RAG1P15918 1043 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 ITGB5P18084 799 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 MTMR1Q13613 665 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 NEDD9Q14511 834 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 ME3Q16798 604 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 HSDL1Q3SXM5 330 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 MCTP2Q6DN12 878 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 CYFIP1Q7L576 1253 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 FAM126BQ8IXS8 530 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 SLC43A3Q8NBI5 491 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 PPP1R13LQ8WUF5 828 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 TRIM43Q96BQ3 446 aaPredicted RBP14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 GPRASP2Q96D09 838 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 CDHR1Q96JP9 859 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 GDF15Q99988 308 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 SEZ6LQ9BYH1 1024 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 SH3GLB2Q9NR46 395 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 PKD2L1Q9P0L9 805 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 UBIAD1Q9Y5Z9 338 aa14.4□□□□□ -0.1
SMARCE1-218ENST00000582955 MYH7BA7E2Y1 1941 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 ADAMTS3O15072 1205 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 DTNBO60941 627 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 ZNF286BP0CG31 522 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 ZNF76P36508 570 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 SREBF1P36956 1147 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 RBM25P49756 843 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 ARHGAP4P98171 946 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 SP4Q02446 784 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 NBPF20Q3BBV1 942 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 METTL7BQ6UX53 244 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 RASGRP4Q8TDF6 673 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 GTF3C6Q969F1 213 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 AIFM3Q96NN9 605 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 UBE2OQ9C0C9 1292 aaKnown RBP14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 BCAS3Q9H6U6 928 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 JADE2Q9NQC1 790 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 STK36Q9NRP7 1315 aa14.39□□□□□ -0.11
SMARCE1-218ENST00000582955 KIAA0355O15063 1070 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 B4GALT4O60513 344 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 HABP4Q5JVS0 413 aaKnown RBP14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 GIMAP8Q8ND71 665 aaPredicted RBP14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 BADQ92934 168 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 KIF2CQ99661 725 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 SENP7Q9BQF6 1050 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 MXRA8Q9BRK3 442 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 KATNAL1Q9BW62 490 aa14.38□□□□□ -0.11
SMARCE1-218ENST00000582955 TRPV6Q9H1D0 765 aa14.38□□□□□ -0.11
Retrieved 100 of 20,778 RNA–protein pairs in 24.4 ms