RNA–Protein interactions for RNA: ENST00000582772.1

MSI2-216, Transcript of musashi RNA binding protein 2, human

TSL 3

Gene MSI2, Length 398 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
MSI2-216	ENST00000582772	TEC	P42680	631 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	RHBDL3	P58872	404 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	PURA	Q00577	322 aa	Known RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	GOLGA2	Q08379	1002 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	TPRN	Q4KMQ1	711 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	CES5A	Q6NT32	575 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	XRRA1	Q6P2D8	792 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	TRAF7	Q6Q0C0	670 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	MAMSTR	Q6ZN01	415 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	ARHGAP30	Q7Z6I6	1101 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	WDR66	Q8TBY9	1149 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	IL17RA	Q96F46	866 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	WBP1	Q96G27	269 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	KLHL5	Q96PQ7	755 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	PHF12	Q96QT6	1004 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	SIN3A	Q96ST3	1273 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	METTL22	Q9BUU2	404 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	RPAP3	Q9H6T3	665 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	POLR3E	Q9NVU0	708 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	HSPBP1	Q9NZL4	362 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	IL17B	Q9UHF5	180 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	CDH22	Q9UJ99	828 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	IQSEC3	Q9UPP2	1182 aa	Predicted RBP	6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	C2orf16	Q68DN1	1984 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	MTOR	P42345	2549 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	DOCK8	Q8NF50	2099 aa		6.29	□□□□□ -1.4
MSI2-216	ENST00000582772	EMSY	Q7Z589	1322 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	FNDC1	Q4ZHG4	1894 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-216	ENST00000582772		H7C1W4	665 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	GDF11	O95390	407 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	MMP3	P08254	477 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	PRDX5	P30044	214 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	CNR2	P34972	360 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	COPB2	P35606	906 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	TNFAIP2	Q03169	654 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	MBTPS1	Q14703	1052 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	PLA2G2C	Q5R387	149 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	RNF43	Q68DV7	783 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	KIAA1211L	Q6NV74	962 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	DHX30	Q7L2E3	1194 aa	Known RBP eCLIP	6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	VPS37D	Q86XT2	251 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	RIOX2	Q8IUF8	465 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	POF1B	Q8WVV4	589 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	ACSF2	Q96CM8	615 aa	Predicted RBP	6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	LOXL4	Q96JB6	756 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	FOXQ1	Q9C009	403 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	DNAJC18	Q9H819	358 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	JADE2	Q9NQC1	790 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	CA14	Q9ULX7	337 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	CACNA1E	Q15878	2313 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	CACNA1D	Q01668	2161 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	TTC3	P53804	2025 aa		6.28	□□□□□ -1.4
MSI2-216	ENST00000582772	ASCC3	Q8N3C0	2202 aa	Known RBP	6.27	□□□□□ -1.4
MSI2-216	ENST00000582772	SALL3	Q9BXA9	1300 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	ATG2B	Q96BY7	2078 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	CELSR2	Q9HCU4	2923 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	TEX51	A0A1B0GUA7	166 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	C11orf97	A0A1B0GVM6	126 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	LRRN2	O75325	713 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	MAP4K4	O95819	1239 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	CKB	P12277	381 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	RPS9	P46781	194 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	UBE3A	Q05086	875 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	SIM2	Q14190	667 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	GCKR	Q14397	625 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	PLEKHG4	Q58EX7	1191 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	DAB2IP	Q5VWQ8	1189 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	PDE12	Q6L8Q7	609 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	RUFY4	Q6ZNE9	571 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	SESTD1	Q86VW0	696 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	DHX38	Q92620	1227 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	CLDN23	Q96B33	292 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	FAM163A	Q96GL9	167 aa	Predicted RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	SHD	Q96IW2	340 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	FGD4	Q96M96	766 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	PURB	Q96QR8	312 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	GPR20	Q99678	358 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	IFIH1	Q9BYX4	1025 aa	Known RBP	6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	AP5M1	Q9H0R1	490 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	PANK3	Q9H999	370 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	SLC2A4RG	Q9NR83	387 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	AKAP9	Q99996	3911 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	CRYBG3	Q68DQ2	2970 aa		6.27	□□□□□ -1.41
MSI2-216	ENST00000582772	FRMPD2	Q68DX3	1309 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	NAV1	Q8NEY1	1877 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	LOC101059915	A0A1B0GWI6	518 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	KANSL1L	A0AUZ9	987 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	PER2	O15055	1255 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CSPG5	O95196	566 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	IGKV5-2	P06315	115 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CR2	P20023	1033 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	ABCG1	P45844	678 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CASP7	P55210	303 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	PICALM	Q13492	652 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	NONO	Q15233	471 aa	Known RBP eCLIP	6.26	□□□□□ -1.41	2e-7	■■■■□ 25.4
MSI2-216	ENST00000582772	SHROOM1	Q2M3G4	852 aa	Predicted RBP	6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	CAVIN4	Q5BKX8	364 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	HDGFL1	Q5TGJ6	251 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	DCLRE1A	Q6PJP8	1040 aa		6.26	□□□□□ -1.41
MSI2-216	ENST00000582772	TSSK4	Q6SA08	328 aa		6.26	□□□□□ -1.41

Retrieved 100 of 20,778 RNA–protein pairs in 21 ms