RNA–Protein interactions for RNA: ENST00000581708.5

CDK5RAP3-222, Transcript of CDK5 regulatory subunit associated protein 3, humanhuman

TSL 4

Gene CDK5RAP3, Length 543 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDK5RAP3-222ENST00000581708 EPHB4P54760 987 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 MRPS9P82933 396 aaKnown RBP14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 RASIP1Q5U651 963 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 USP17L6PQ6QN14 398 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 NLRX1Q86UT6 975 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 DEFB123Q8N688 67 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 CCDC155Q8N6L0 562 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 SPATA33Q96N06 139 aa14.47□□□□□ -0.09
CDK5RAP3-222ENST00000581708 SPDYE3A6NKU9 549 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 HAS3O00219 553 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 PARNO95453 639 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 GGPS1O95749 300 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 RPS6KB1P23443 525 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 METAP2P50579 478 aaKnown RBP eCLIP14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 EVCP57679 992 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 BFSP2Q13515 415 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 FAM47CQ5HY64 1035 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 TMEM240Q5SV17 173 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 MCTP2Q6DN12 878 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 METTL7BQ6UX53 244 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 HEATR3Q7Z4Q2 680 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 CMTR1Q8N1G2 835 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 CCDC82Q8N4S0 544 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 CAGE1Q8TC20 777 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 KAT2BQ92831 832 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 GPRASP2Q96D09 838 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 BUD13Q9BRD0 619 aaKnown RBP eCLIP14.46□□□□□ -0.099e-16■□□□□ 9
CDK5RAP3-222ENST00000581708 PPP1R12CQ9BZL4 782 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 TM6SF1Q9BZW5 370 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 MLXIPQ9HAP2 919 aa14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 TRMT13Q9NUP7 481 aaKnown RBP14.46□□□□□ -0.09
CDK5RAP3-222ENST00000581708 HSFX4A0A1B0GTS1 333 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 HSFX3A0A1B0GWH4 333 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CYP2C18P33260 490 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 SP2Q02086 613 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RBL2Q08999 1139 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 Q6ZUG5 572 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 C7orf31Q8N865 590 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RETREG2Q8NC44 543 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 HERVK_113Q902F9 699 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 TCEANC2Q96MN5 208 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 USP26Q9BXU7 913 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RIC8AQ9NPQ8 531 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 FAM217BQ9NTX9 383 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 MTMR10Q9NXD2 777 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 BARHL2Q9NY43 387 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 NOD1Q9Y239 953 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 V9GY48 417 aaPredicted RBP14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 MYH7BA7E2Y1 1941 aa14.45□□□□□ -0.1
CDK5RAP3-222ENST00000581708 FGBP02675 491 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PSEN2P49810 448 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 NAPAP54920 295 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 HSDL1Q3SXM5 330 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ZNF697Q5TEC3 545 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 WWC2Q6AWC2 1192 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 C16orf59Q7L2K0 433 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RAB11FIP4Q86YS3 637 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CCDC12Q8WUD4 166 aaPredicted RBP14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 BRF1Q92994 677 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 WNT8AQ9H1J5 351 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ZSWIM6Q9HCJ5 1215 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 GTF2IRD1Q9UHL9 959 aa14.44□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ESYT2A0FGR8 921 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 STXBP3O00186 592 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 NOP56O00567 594 aaKnown RBP14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CYP2C9P11712 490 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 AP3B2Q13367 1082 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 MFSD10Q14728 455 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PTGISQ16647 500 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PFKFB3Q16875 520 aaPredicted RBP14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ZNF365Q70YC5 407 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RUFY3Q7L099 469 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 AFAP1L1Q8TED9 768 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PCDHA6Q9UN73 950 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 STXBP5LQ9Y2K9 1186 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PCDHA8Q9Y5H6 950 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CYP46A1Q9Y6A2 500 aa14.43□□□□□ -0.1
CDK5RAP3-222ENST00000581708 UMODL1Q5DID0 1318 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 hCG_1642624A0A1W2PR95 340 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 H3BRB1 525 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PRPF3O43395 683 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ACTN1P12814 892 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 SCG2P13521 617 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CDC27P30260 824 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ADD1P35611 737 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 ADCY7P51828 1080 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 CCL23P55773 120 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 APOBRQ0VD83 1088 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 SEMA3FQ13275 785 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 PTK7Q13308 1070 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 KIAA0753Q2KHM9 967 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 FAM177A1Q8N128 213 aaPredicted RBP14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 GPKOWQ92917 476 aaPredicted RBP eCLIP14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 C16orf70Q9BSU1 422 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 TUT1Q9H6E5 874 aaKnown RBP14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 RTEL1Q9NZ71 1219 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 UBIAD1Q9Y5Z9 338 aa14.42□□□□□ -0.1
CDK5RAP3-222ENST00000581708 SMCO2A6NFE2 343 aa14.41□□□□□ -0.1
CDK5RAP3-222ENST00000581708 IQCF3P0C7M6 154 aa14.41□□□□□ -0.1
CDK5RAP3-222ENST00000581708 GNAT1P11488 350 aa14.41□□□□□ -0.1
Retrieved 100 of 20,778 RNA–protein pairs in 24.5 ms