RNA–Protein interactions for RNA: ENST00000581161.5

RTTN-206, Transcript of rotatin, humanhuman

TSL 1 (best)

Gene RTTN, Length 6,722 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTTN-206ENST00000581161 ATP5DP30049 168 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KRT9P35527 623 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 CAPZA2P47755 286 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 NRG3P56975 720 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KRT33BQ14525 404 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 ESRP1Q6NXG1 681 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 NELFBQ8WX92 580 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 LZICQ8WZA0 190 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 TRIM47Q96LD4 638 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 CEP19Q96LK0 163 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 TEX13AQ9BXU3 409 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 IQSEC3Q9UPP2 1182 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 RTL9Q8NET4 1388 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KCNJ18B7U540 433 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 ITGA6P23229 1130 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 MCM7P33993 719 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KRT2P35908 639 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 LIG3P49916 1009 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 ESRRGP62508 458 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 MRPS25P82663 173 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 MAP3K12Q12852 859 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KCNJ12Q14500 433 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 PSMD6Q15008 389 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 BEND6Q5SZJ8 279 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 USP49Q70CQ1 688 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 KRT77Q7Z794 578 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 PAGE5Q96GU1 130 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 EIF3CQ99613 913 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 MRPS26Q9BYN8 205 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 ZNF212Q9UDV6 495 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 MTRF1LQ9UGC7 380 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 TYW5A2RUC4 315 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 ARHGEF9O43307 516 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 PRKAB2O43741 272 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 HLA-DOAP06340 250 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 NFKBIAP25963 317 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 SLC12A2P55011 1212 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 LACTBP83111 547 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 TBX2Q13207 712 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 SNX1Q13596 522 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 C1orf228Q6PIY5 440 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 NOA1Q8NC60 698 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 CCT7Q99832 543 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 LRP2BPQ9P2M1 347 aa4.64□□□□□ -1.67
RTTN-206ENST00000581161 TRMT112Q9UI30 125 aaKnown RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 FBXO2Q9UK22 296 aaPredicted RBP4.64□□□□□ -1.67
RTTN-206ENST00000581161 A0A1B0GTH6 734 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 RGS5O15539 181 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 CIAO1O76071 339 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 NPR1P16066 1061 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 BMP6P22004 513 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 GBP1P32455 592 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 SPAG1Q07617 926 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 EIF2B5Q13144 721 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 TUBB2AQ13885 445 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 ZC3H12BQ5HYM0 836 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 TOM1L2Q6ZVM7 507 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 SND1Q7KZF4 910 aaKnown RBP eCLIP4.63□□□□□ -1.67
RTTN-206ENST00000581161 DPH6Q7L8W6 267 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 LMBR1Q8WVP7 490 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 TEKT4Q8WW24 435 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 MMS19Q96T76 1030 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 TUBB2BQ9BVA1 445 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 MKNK2Q9HBH9 465 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 AIPL1Q9NZN9 384 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 SUCLA2Q9P2R7 463 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 NUB1Q9Y5A7 615 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 V9GY48 417 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 KRT87PA6NCN2 255 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 KIF1CO43896 1103 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 HEXIM1O94992 359 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 MCAMP43121 646 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 PAK1Q13153 545 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 RPS6KA2Q15349 733 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 PIK3AP1Q6ZUJ8 805 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 NANOGNBQ7Z5D8 188 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 DDX17Q92841 729 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 CCDC51Q96ER9 411 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 RSRC1Q96IZ7 334 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 PSMB7Q99436 277 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 OSBPL10Q9BXB5 764 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 EDEM3Q9BZQ6 932 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 NDEL1Q9GZM8 345 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 CNNM2Q9H8M5 875 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 EFCC1Q9HA90 598 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 FNDC3AQ9Y2H6 1198 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 LRRIQ3A6PVS8 624 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 CYP27B1O15528 508 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 NPM3O75607 178 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 MYL1P05976 194 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 COPB1P53618 953 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 C2orf54Q08AI8 447 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 NR1I3Q14994 352 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 KRT31Q15323 416 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 CCDC84Q86UT8 332 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 IFNL3Q8IZI9 196 aa4.63□□□□□ -1.67
RTTN-206ENST00000581161 RIN2Q8WYP3 895 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 RPGRQ92834 1020 aaKnown RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 DMAP1Q9NPF5 467 aaPredicted RBP4.63□□□□□ -1.67
RTTN-206ENST00000581161 MED4Q9NPJ6 270 aa4.63□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 18 ms