RNA–Protein interactions for RNA: ENST00000580654.5

SMARCE1-217, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 5

Gene SMARCE1, Length 554 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-217ENST00000580654 LINC00271P0C7V0 271 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 ATRXP46100 2492 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 ALDH5A1P51649 535 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 SNAP25P60880 206 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 TTF1Q15361 905 aaPredicted RBP9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 TKFCQ3LXA3 575 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 MYOCDQ8IZQ8 938 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 LRRC47Q8N1G4 583 aaKnown RBP9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 KAT2BQ92831 832 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 WNT2BQ93097 391 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 CD207Q9UJ71 328 aa9.18□□□□□ -0.94
SMARCE1-217ENST00000580654 GOLGA8CPA6NN73 597 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 TMEM232C9JQI7 657 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 GOLIM4O00461 696 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 GRM6O15303 877 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 ARIH2O95376 493 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 EYA4O95677 639 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 FDX1P10109 184 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 BMP3P12645 472 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 TRIM27P14373 513 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 ADD2P35612 726 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 CHMP4BP1P59074 171 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 ADAM15Q13444 863 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 ZNF618Q5T7W0 954 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 SLFN13Q68D06 897 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 NSMFQ6X4W1 530 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 RPAP2Q8IXW5 612 aaPredicted RBP9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 STK11IPQ8N1F8 1099 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 GMCL1P1Q8NEA9 526 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 DBF4BQ8NFT6 615 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 CEP95Q96GE4 821 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 OSBPL7Q9BZF2 842 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 CLEC1BQ9P126 229 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 KIAA1671Q9BY89 1806 aa9.17□□□□□ -0.94
SMARCE1-217ENST00000580654 C5orf67F2Z3F1 127 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 NKRFO15226 690 aaKnown RBP eCLIP9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 AMHP03971 560 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 RARSP54136 660 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 RRP1P56182 461 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 CAMK1Q14012 370 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 BAATQ14032 418 aaPredicted RBP9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 HIC1Q14526 733 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 RASGRP2Q7LDG7 609 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 AACSQ86V21 672 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 ADSSL1Q8N142 457 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 STAG1Q8WVM7 1258 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 TOP1MTQ969P6 601 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 CHMP4CQ96CF2 233 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 DNAJC2Q99543 621 aaKnown RBP9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 IGFLR1Q9H665 355 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 C1orf115Q9H7X2 142 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 MTMR4Q9NYA4 1195 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 HDAC6Q9UBN7 1215 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 GTF2IRD1Q9UHL9 959 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 SLC4A4Q9Y6R1 1079 aa9.16□□□□□ -0.94
SMARCE1-217ENST00000580654 KIAA1217Q5T5P2 1943 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 RAD50Q92878 1312 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 LOC101059915A0A1B0GWI6 518 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 STK25O00506 426 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 NFIBO00712 420 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 KDM4AO75164 1064 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 MMP3P08254 477 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 CT47B1P0C2W7 299 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 EDNRBP24530 442 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 STAT2P52630 851 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 FOXK1P85037 733 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 ZNF200P98182 395 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 PPP2R5BQ15173 497 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 SBK1Q52WX2 424 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 PLEKHG4Q58EX7 1191 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 BRDTQ58F21 947 aaPredicted RBP9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 FRMD5Q7Z6J6 570 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 AMOTL1Q8IY63 956 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 TMEM105Q8N8V8 129 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 SMRP1Q8NCR6 262 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 AFG1LQ8WV93 481 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 RMDN1Q96DB5 314 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 CNTNAP3BQ96NU0 1288 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 YME1L1Q96TA2 773 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 CNTNAP3Q9BZ76 1288 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 LMAN2LQ9H0V9 348 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 SYNPO2Q9UMS6 1093 aa9.15□□□□□ -0.94
SMARCE1-217ENST00000580654 LOC102724159A0A0B4J2E5 919 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PRDM1O75626 825 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 UPP2O95045 317 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 CSPG5O95196 566 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 TXNP10599 105 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 CTNNB1P35222 781 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 ARHGAP1Q07960 439 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 COASYQ13057 564 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PTK7Q13308 1070 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PWP2Q15269 919 aaKnown RBP9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 CCDC62Q6P9F0 684 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 SLC30A10Q6XR72 485 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 ADGRD2Q7Z7M1 963 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 FAM160B2Q86V87 743 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 PLPP6Q8IY26 295 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 SCFD2Q8WU76 684 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 CHURC1Q8WUH1 139 aa9.14□□□□□ -0.95
SMARCE1-217ENST00000580654 NKD2Q969F2 451 aaPredicted RBP9.14□□□□□ -0.95
Retrieved 100 of 20,778 RNA–protein pairs in 24.3 ms