RNA–Protein interactions for RNA: ENST00000579329.1

LIMD2-207, Transcript of LIM domain containing 2, humanhuman

TSL 1 (best)

Gene LIMD2, Length 920 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMD2-207ENST00000579329 ITGA7Q13683 1181 aa27.42■■□□□ 1.98
LIMD2-207ENST00000579329 DHX37Q8IY37 1157 aaKnown RBP27.42■■□□□ 1.98
LIMD2-207ENST00000579329 MTG1Q9BT17 334 aaPredicted RBP27.42■■□□□ 1.98
LIMD2-207ENST00000579329 SLKQ9H2G2 1235 aaPredicted RBP27.42■■□□□ 1.98
LIMD2-207ENST00000579329 RTEL1Q9NZ71 1219 aa27.42■■□□□ 1.98
LIMD2-207ENST00000579329 FIBPO43427 364 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 PPFIA3O75145 1194 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 MMP3P08254 477 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 UBA1P22314 1058 aaKnown RBP27.41■■□□□ 1.98
LIMD2-207ENST00000579329 AP3B2Q13367 1082 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 NLRX1Q86UT6 975 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 SLC43A3Q8NBI5 491 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 CCDC148Q8NFR7 591 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 C6orf50Q9HD87 102 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 TPCN1Q9ULQ1 816 aa27.41■■□□□ 1.98
LIMD2-207ENST00000579329 GGPS1O95749 300 aa27.4■■□□□ 1.98
LIMD2-207ENST00000579329 MAGEA10P43363 369 aaPredicted RBP27.4■■□□□ 1.98
LIMD2-207ENST00000579329 NEK4P51957 841 aa27.4■■□□□ 1.98
LIMD2-207ENST00000579329 PSMC6P62333 389 aa27.4■■□□□ 1.98
LIMD2-207ENST00000579329 CELF3Q5SZQ8 465 aaKnown RBP27.4■■□□□ 1.98
LIMD2-207ENST00000579329 ANO3Q9BYT9 981 aa27.4■■□□□ 1.98
LIMD2-207ENST00000579329 ZMYND12Q9H0C1 365 aa27.4■■□□□ 1.98
LIMD2-207ENST00000579329 SPATA31C2B4DYI2 1134 aa27.39■■□□□ 1.98
LIMD2-207ENST00000579329 TLR3O15455 904 aaKnown RBP27.39■■□□□ 1.98
LIMD2-207ENST00000579329 PFKFB2O60825 505 aa27.39■■□□□ 1.98
LIMD2-207ENST00000579329 CDKL5O76039 1030 aa27.39■■□□□ 1.98
LIMD2-207ENST00000579329 CLK2P49760 499 aaKnown RBP27.39■■□□□ 1.98
LIMD2-207ENST00000579329 SCRN1Q12765 414 aa27.39■■□□□ 1.98
LIMD2-207ENST00000579329 PPTC7Q8NI37 304 aa27.39■■□□□ 1.98
LIMD2-207ENST00000579329 LBHD1Q9BQE6 289 aaPredicted RBP27.39■■□□□ 1.98
LIMD2-207ENST00000579329 GRIN2DO15399 1336 aa27.39■■□□□ 1.97
LIMD2-207ENST00000579329 DEXIO95424 95 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 GNA11P29992 359 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 SP2Q02086 613 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 FAAP100Q0VG06 881 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 MYSM1Q5VVJ2 828 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 MCTP2Q6DN12 878 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 GPR153Q6NV75 609 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 Q7L0L9 218 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 SH3RF1Q7Z6J0 888 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 FAM126BQ8IXS8 530 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 DEFB123Q8N688 67 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 GPRASP2Q96D09 838 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 PGBD1Q96JS3 809 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 TMEM39AQ9NV64 488 aa27.38■■□□□ 1.97
LIMD2-207ENST00000579329 TRIM43BA6NCK2 446 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 KIAA0355O15063 1070 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 MDM2Q00987 491 aaPredicted RBP27.37■■□□□ 1.97
LIMD2-207ENST00000579329 SEMA3FQ13275 785 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 NEDD9Q14511 834 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 DGKDQ16760 1214 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 TRIM43Q96BQ3 446 aaPredicted RBP27.37■■□□□ 1.97
LIMD2-207ENST00000579329 CDHR1Q96JP9 859 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 SPATA33Q96N06 139 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 MLXIPQ9HAP2 919 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 SH3GLB2Q9NR46 395 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 TMEM260Q9NX78 707 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 VPS54Q9P1Q0 977 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 UBIAD1Q9Y5Z9 338 aa27.37■■□□□ 1.97
LIMD2-207ENST00000579329 BICD2Q8TD16 824 aa27.36■■□□□ 1.97
LIMD2-207ENST00000579329 LTBP2Q14767 1821 aa27.36■■□□□ 1.97
LIMD2-207ENST00000579329 SCN10AQ9Y5Y9 1956 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 SORBS3O60504 671 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 SREBF1P36956 1147 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 LRIT3Q3SXY7 679 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 JAKMIP3Q5VZ66 844 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 REXO1Q8N1G1 1221 aaKnown RBP27.35■■□□□ 1.97
LIMD2-207ENST00000579329 SENP7Q9BQF6 1050 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 C22orf23Q9BZE7 217 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 TBX21Q9UL17 535 aa27.35■■□□□ 1.97
LIMD2-207ENST00000579329 MYH7BA7E2Y1 1941 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 CD4P01730 458 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 HOXD8P13378 290 aaPredicted RBP27.34■■□□□ 1.97
LIMD2-207ENST00000579329 ITGB5P18084 799 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 HSDL1Q3SXM5 330 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 METTL7BQ6UX53 244 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 TDHQ8IZJ6 230 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 JADE2Q9NQC1 790 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 STK36Q9NRP7 1315 aa27.34■■□□□ 1.97
LIMD2-207ENST00000579329 RAG1P15918 1043 aa27.33■■□□□ 1.97
LIMD2-207ENST00000579329 NLRP5P59047 1200 aa27.33■■□□□ 1.97
LIMD2-207ENST00000579329 MTMR1Q13613 665 aa27.33■■□□□ 1.97
LIMD2-207ENST00000579329 ME3Q16798 604 aa27.33■■□□□ 1.97
LIMD2-207ENST00000579329 NBPF20Q3BBV1 942 aa27.33■■□□□ 1.97
LIMD2-207ENST00000579329 FAM177A1Q8N128 213 aaPredicted RBP27.33■■□□□ 1.97
LIMD2-207ENST00000579329 GIMAP8Q8ND71 665 aaPredicted RBP27.33■■□□□ 1.97
LIMD2-207ENST00000579329 UBE2OQ9C0C9 1292 aaKnown RBP27.33■■□□□ 1.97
LIMD2-207ENST00000579329 MAFGO15525 162 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 PPFIA4O75335 1185 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 RBM25P49756 843 aaKnown RBP27.32■■□□□ 1.96
LIMD2-207ENST00000579329 PTPN11Q06124 597 aaPredicted RBP27.32■■□□□ 1.96
LIMD2-207ENST00000579329 FAM47CQ5HY64 1035 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 NFRKBQ6P4R8 1299 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 CYFIP1Q7L576 1253 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 BADQ92934 168 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 MXRA8Q9BRK3 442 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 KATNAL1Q9BW62 490 aa27.32■■□□□ 1.96
LIMD2-207ENST00000579329 UPF2Q9HAU5 1272 aaKnown RBP27.32■■□□□ 1.96
LIMD2-207ENST00000579329 NOP56O00567 594 aaKnown RBP27.31■■□□□ 1.96
LIMD2-207ENST00000579329 LARGE1O95461 756 aa27.31■■□□□ 1.96
Retrieved 100 of 20,778 RNA–protein pairs in 28.5 ms