RNA–Protein interactions for RNA: ENST00000578995.5

SMARCE1-215, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily e, member 1, humanhuman

TSL 2

Gene SMARCE1, Length 534 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCE1-215ENST00000578995 JMYQ8N9B5 988 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 STAG1Q8WVM7 1258 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 WNK4Q96J92 1243 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 WRNIP1Q96S55 665 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 NOL10Q9BSC4 688 aaKnown RBP4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 GSX2Q9BZM3 304 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 ZNF408Q9H9D4 720 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 IL17RBQ9NRM6 502 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 AFG3L2Q9Y4W6 797 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 RBM8AQ9Y5S9 174 aaKnown RBP4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 DOCK5Q9H7D0 1870 aa4.51□□□□□ -1.69
SMARCE1-215ENST00000578995 WDR64B1ANS9 1081 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 IGF2BP3O00425 579 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 SLC27A2O14975 620 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 EPB41L2O43491 1005 aaKnown RBP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CTNND1O60716 968 aaKnown RBP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 GH2P01242 217 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 PRNPP04156 253 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 ZBTB48P10074 688 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 NFKB1P19838 968 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 HSPA4P34932 840 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 TDO2P48775 406 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 HUNKP57058 714 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 HAND2P61296 217 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CAP1Q01518 475 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 PLAURQ03405 335 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 PPIL2Q13356 520 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CCINQ13939 588 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 PRKG1Q13976 671 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 SEC23AQ15436 765 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 MAP7D1Q3KQU3 841 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 DCAF15Q66K64 600 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CYP4F22Q6NT55 531 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 RGMBQ6NW40 437 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CYB5R4Q7L1T6 521 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 RASGRP2Q7LDG7 609 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 ARMC9Q7Z3E5 817 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 TTC6Q86TZ1 520 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 ERO1BQ86YB8 467 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 MB21D2Q8IYB1 491 aaPredicted RBP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 GIMAP7Q8NHV1 300 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 ACER1Q8TDN7 264 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 BRI3BPQ8WY22 251 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 OPTNQ96CV9 577 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 HOOK2Q96ED9 719 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 CAPNS2Q96L46 248 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 SLC38A3Q99624 504 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 KIF2CQ99661 725 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 PTPN18Q99952 460 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 FAM83CQ9BQN1 747 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 WDR18Q9BV38 432 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 USP26Q9BXU7 913 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 NAPBQ9H115 298 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 ELP3Q9H9T3 547 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 XPO5Q9HAV4 1204 aaKnown RBP eCLIP4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 GINM1Q9NU53 330 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 SWAP70Q9UH65 585 aa4.5□□□□□ -1.69
SMARCE1-215ENST00000578995 WDR33Q9C0J8 1336 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ALPK3Q96L96 1907 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 A0A0G2JLL6 359 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 MINDY4BA8MYZ0 360 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 BIN1O00499 593 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 PPP1R12BO60237 982 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 NMT2O60551 498 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 AOC2O75106 756 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 PRDM1O75626 825 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 POLR3DP05423 398 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 HLA-DOAP06340 250 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ASNSP08243 561 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 NF2P35240 595 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ECE1P42892 770 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 TM4SF4P48230 202 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 MFAP1P55081 439 aaKnown RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 PPATQ06203 517 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 SEPT2Q15019 361 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 DEFB115Q30KQ5 88 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ADCK5Q3MIX3 580 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 AKNAD1Q5T1N1 836 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 CREB3L3Q68CJ9 461 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 PRRT2Q7Z6L0 340 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ZSCAN29Q8IWY8 852 aaPredicted RBP4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 C2orf69Q8N8R5 385 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 AGBL5Q8NDL9 886 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 RUFY2Q8WXA3 655 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 ANKS1AQ92625 1134 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 MKL1Q969V6 931 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 CEP95Q96GE4 821 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 DDRGK1Q96HY6 314 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 SUSD3Q96L08 255 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 C12orf42Q96LP6 360 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 MYRFLQ96LU7 910 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 TCP11L1Q9NUJ3 509 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 SNX14Q9Y5W7 946 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 NID2Q14112 1375 aa4.49□□□□□ -1.69
SMARCE1-215ENST00000578995 B4E1Z4 1266 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 E7EWF7 191 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 CXCL11O14625 94 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 PAPLNO95428 1278 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 APPP05067 770 aa4.48□□□□□ -1.69
SMARCE1-215ENST00000578995 SNHG28P0DPA3 235 aa4.48□□□□□ -1.69
Retrieved 100 of 20,778 RNA–protein pairs in 54.6 ms