RNA–Protein interactions for RNA: ENST00000577897.1

SREBF1-217, Transcript of sterol regulatory element binding transcription factor 1, humanhuman

TSL 4

Gene SREBF1, Length 536 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SREBF1-217ENST00000577897 SUPT20HL2P0C7V6 817 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 SMPD1P17405 629 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 TRIM29Q14134 588 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 EEPD1Q7L9B9 569 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 TRIM22Q8IYM9 498 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 PRPF38AQ8NAV1 312 aaKnown RBP16.09■□□□□ 0.17
SREBF1-217ENST00000577897 IGDCC4Q8TDY8 1250 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 ZNF396Q96N95 335 aaPredicted RBP16.09■□□□□ 0.17
SREBF1-217ENST00000577897 ZSWIM5Q9P217 1185 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 TNKSO95271 1327 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 NEDD4P46934 1319 aa16.09■□□□□ 0.17
SREBF1-217ENST00000577897 LCHNA4D1U4 455 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 GOLGA6L4A6NEF3 574 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 ATP2A1O14983 1001 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 ORC4O43929 436 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 UBE2HP62256 183 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 LEXMQ3ZCV2 418 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 FAM47CQ5HY64 1035 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 PTCRAQ6ISU1 281 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-217ENST00000577897 CTR9Q6PD62 1173 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 C16orf86Q6ZW13 317 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 CYB5R4Q7L1T6 521 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 CHST13Q8NET6 341 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.08■□□□□ 0.16
SREBF1-217ENST00000577897 LY9Q9HBG7 655 aa16.08■□□□□ 0.16
SREBF1-217ENST00000577897 USP17L12C9JPN9 530 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 USP17L21D6R901 530 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 DCXO43602 365 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 JAK2O60674 1132 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 NDUFB10O96000 172 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 FGRP09769 529 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 KCNJ6P48051 423 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 TMEM63BQ5T3F8 832 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 C12orf60Q5U649 245 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 APOA5Q6Q788 366 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 TMCO2Q7Z6W1 182 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-217ENST00000577897 CATIPQ7Z7H3 387 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 FBXO16Q8IX29 292 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-217ENST00000577897 C8orf76Q96K31 380 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 ZBED2Q9BTP6 218 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 GZF1Q9H116 711 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-217ENST00000577897 PDGFCQ9NRA1 345 aa16.07■□□□□ 0.16
SREBF1-217ENST00000577897 RBM28Q9NW13 759 aaKnown RBP16.07■□□□□ 0.16
SREBF1-217ENST00000577897 ORC3Q9UBD5 711 aaPredicted RBP16.07■□□□□ 0.16
SREBF1-217ENST00000577897 STK36Q9NRP7 1315 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 ASB14A6NK59 587 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 F5H6K3 240 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 RANBP6O60518 1105 aaKnown RBP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 XBP1P17861 261 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 RFC2P35250 354 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 AKAP17AQ02040 695 aaKnown RBP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 KLRC3Q07444 240 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 SSRP1Q08945 709 aaKnown RBP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 DHX30Q7L2E3 1194 aaKnown RBP eCLIP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 RETREG2Q8NC44 543 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 PPP1R13LQ8WUF5 828 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 ANKS1AQ92625 1134 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 ZSCAN10Q96SZ4 725 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 LMCD1Q9NZU5 365 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 BRPF3Q9ULD4 1205 aa16.06■□□□□ 0.16
SREBF1-217ENST00000577897 PTPRZ1P23471 2315 aaPredicted RBP16.06■□□□□ 0.16
SREBF1-217ENST00000577897 TANC1Q9C0D5 1861 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 ZFHX2Q9C0A1 2572 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-217ENST00000577897 NID2Q14112 1375 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP16.05■□□□□ 0.16
SREBF1-217ENST00000577897 SOWAHBA6NEL2 793 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 MYL3P08590 195 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 IQCF3P0C7M6 154 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 RTN1Q16799 776 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 IFIT1BQ5T764 474 aaKnown RBP16.05■□□□□ 0.16
SREBF1-217ENST00000577897 MICU3Q86XE3 530 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 STK11IPQ8N1F8 1099 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 FAM133AQ8N9E0 248 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 PHOX2BQ99453 314 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 ACAD9Q9H845 621 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 MKNK2Q9HBH9 465 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 SLC38A10Q9HBR0 1119 aa16.05■□□□□ 0.16
SREBF1-217ENST00000577897 NCOA5Q9HCD5 579 aaKnown RBP16.05■□□□□ 0.16
SREBF1-217ENST00000577897 PTPRSQ13332 1948 aa16.04■□□□□ 0.16
SREBF1-217ENST00000577897 TSPY2A6NKD2 308 aa16.04■□□□□ 0.16
SREBF1-217ENST00000577897 FIBPO43427 364 aa16.04■□□□□ 0.16
SREBF1-217ENST00000577897 GNL2Q13823 731 aaKnown RBP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 COL9A3Q14050 684 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 SAFBQ15424 915 aaKnown RBP eCLIP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 BRAPQ7Z569 592 aa16.04■□□□□ 0.16
SREBF1-217ENST00000577897 ZNF444Q8N0Y2 327 aaPredicted RBP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 GNL3Q9BVP2 549 aaKnown RBP eCLIP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 SUGCTQ9HAC7 445 aa16.04■□□□□ 0.16
SREBF1-217ENST00000577897 A1CFQ9NQ94 594 aaKnown RBP16.04■□□□□ 0.16
SREBF1-217ENST00000577897 H3BQ06 376 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-217ENST00000577897 DDAH1O94760 285 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 BAIAP3O94812 1187 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 CTDNEP1O95476 244 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 DNM1Q05193 864 aaKnown RBP16.03■□□□□ 0.16
SREBF1-217ENST00000577897 FOXD4L6Q3SYB3 417 aaPredicted RBP16.03■□□□□ 0.16
SREBF1-217ENST00000577897 PPP4R3BQ5MIZ7 849 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 IQSEC1Q6DN90 963 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 TAPT1Q6NXT6 567 aa16.03■□□□□ 0.16
SREBF1-217ENST00000577897 CAVIN1Q6NZI2 390 aaKnown RBP16.03■□□□□ 0.16
SREBF1-217ENST00000577897 FOXD4L3Q6VB84 417 aaPredicted RBP16.03■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 37.6 ms