RNA–Protein interactions for RNA: ENST00000577241.1

MSI2-205, Transcript of musashi RNA binding protein 2, humanhuman

TSL 3

Gene MSI2, Length 710 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSI2-205ENST00000577241 TMEM39AQ9NV64 488 aa18.02■□□□□ 0.48
MSI2-205ENST00000577241 SEC24BO95487 1268 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 MMP3P08254 477 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 PTGS1P23219 599 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 MAGEA10P43363 369 aaPredicted RBP18.01■□□□□ 0.47
MSI2-205ENST00000577241 PKN1Q16512 942 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 HABP4Q5JVS0 413 aaKnown RBP18.01■□□□□ 0.47
MSI2-205ENST00000577241 CELF3Q5SZQ8 465 aaKnown RBP18.01■□□□□ 0.47
MSI2-205ENST00000577241 MYSM1Q5VVJ2 828 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 TYW1BQ6NUM6 668 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 BICD2Q8TD16 824 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 AFG1LQ8WV93 481 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 PHKBQ93100 1093 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 GPRASP2Q96D09 838 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 SENP7Q9BQF6 1050 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 ZMYND12Q9H0C1 365 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 SLKQ9H2G2 1235 aaPredicted RBP18.01■□□□□ 0.47
MSI2-205ENST00000577241 MLXIPQ9HAP2 919 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 NCOA5Q9HCD5 579 aaKnown RBP18.01■□□□□ 0.47
MSI2-205ENST00000577241 SH3GLB2Q9NR46 395 aa18.01■□□□□ 0.47
MSI2-205ENST00000577241 SPATA31C2B4DYI2 1134 aa18■□□□□ 0.47
MSI2-205ENST00000577241 KIAA0355O15063 1070 aa18■□□□□ 0.47
MSI2-205ENST00000577241 PPFIA4O75335 1185 aa18■□□□□ 0.47
MSI2-205ENST00000577241 DEXIO95424 95 aa18■□□□□ 0.47
MSI2-205ENST00000577241 GGPS1O95749 300 aa18■□□□□ 0.47
MSI2-205ENST00000577241 PTPN11Q06124 597 aaPredicted RBP18■□□□□ 0.47
MSI2-205ENST00000577241 FAAP100Q0VG06 881 aa18■□□□□ 0.47
MSI2-205ENST00000577241 C8orf34Q49A92 452 aa18■□□□□ 0.47
MSI2-205ENST00000577241 FAM126BQ8IXS8 530 aa18■□□□□ 0.47
MSI2-205ENST00000577241 KATNAL1Q9BW62 490 aa18■□□□□ 0.47
MSI2-205ENST00000577241 RTEL1Q9NZ71 1219 aa18■□□□□ 0.47
MSI2-205ENST00000577241 SUPT20HL2P0C7V6 817 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 RAG1P15918 1043 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 UBA1P22314 1058 aaKnown RBP17.99■□□□□ 0.47
MSI2-205ENST00000577241 NEK4P51957 841 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 STK3Q13188 491 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 NFRKBQ6P4R8 1299 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 METTL7BQ6UX53 244 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 SPATA33Q96N06 139 aa17.99■□□□□ 0.47
MSI2-205ENST00000577241 UBE2OQ9C0C9 1292 aaKnown RBP17.99■□□□□ 0.47
MSI2-205ENST00000577241 TRIM43BA6NCK2 446 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 PFKFB2O60825 505 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 CD4P01730 458 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 HOXD8P13378 290 aaPredicted RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 CLK2P49760 499 aaKnown RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 AK2P54819 239 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 REXO1Q8N1G1 1221 aaKnown RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 IL27Q8NEV9 243 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 TRIM43Q96BQ3 446 aaPredicted RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 LARP6Q9BRS8 491 aaKnown RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 ANO3Q9BYT9 981 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 UPF2Q9HAU5 1272 aaKnown RBP17.98■□□□□ 0.47
MSI2-205ENST00000577241 TPCN1Q9ULQ1 816 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 UBIAD1Q9Y5Z9 338 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 GRIN2DO15399 1336 aa17.98■□□□□ 0.47
MSI2-205ENST00000577241 NOP56O00567 594 aaKnown RBP17.97■□□□□ 0.47
MSI2-205ENST00000577241 SREBF1P36956 1147 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 PSMC6P62333 389 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 MDM2Q00987 491 aaPredicted RBP17.97■□□□□ 0.47
MSI2-205ENST00000577241 SP2Q02086 613 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 MTMR1Q13613 665 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 NBPF20Q3BBV1 942 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 SH3RF1Q7Z6J0 888 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 ZFP91Q96JP5 570 aaPredicted RBP17.97■□□□□ 0.47
MSI2-205ENST00000577241 JADE2Q9NQC1 790 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 TBX21Q9UL17 535 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 KIAA1217Q5T5P2 1943 aa17.97■□□□□ 0.47
MSI2-205ENST00000577241 TIMP1P01033 207 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 XBP1P17861 261 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 NLRP5P59047 1200 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 SCRN1Q12765 414 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 HSDL1Q3SXM5 330 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 GALNT17Q6IS24 598 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 TDHQ8IZJ6 230 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 BADQ92934 168 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 MXRA8Q9BRK3 442 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 C22orf23Q9BZE7 217 aa17.96■□□□□ 0.47
MSI2-205ENST00000577241 STK36Q9NRP7 1315 aa17.96■□□□□ 0.46
MSI2-205ENST00000577241 F2P00734 622 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 ITGB5P18084 799 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 ZNF76P36508 570 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 SEMA3FQ13275 785 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 CEP55Q53EZ4 464 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 FAM47CQ5HY64 1035 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 CYFIP1Q7L576 1253 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 NIPA1Q7RTP0 329 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 SESTD1Q86VW0 696 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 WASF1Q92558 559 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 VPS54Q9P1Q0 977 aa17.95■□□□□ 0.46
MSI2-205ENST00000577241 B4GALT4O60513 344 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 CYP3A4P08684 503 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 ARHGAP4P98171 946 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 JAKMIP3Q5VZ66 844 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 MFSD5Q6N075 450 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 TMEM199Q8N511 208 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 KAT2BQ92831 832 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 TMEM260Q9NX78 707 aa17.94■□□□□ 0.46
MSI2-205ENST00000577241 PPFIA3O75145 1194 aa17.93■□□□□ 0.46
MSI2-205ENST00000577241 KCNA2P16389 499 aa17.93■□□□□ 0.46
MSI2-205ENST00000577241 RBM25P49756 843 aaKnown RBP17.93■□□□□ 0.46
Retrieved 100 of 20,778 RNA–protein pairs in 25.5 ms