RNA–Protein interactions for RNA: ENST00000576084.5

COX11-208, Transcript of cytochrome c oxidase copper chaperone COX11, human

TSL 3

Gene COX11, Length 652 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
COX11-208	ENST00000576084	GPR85	P60893	370 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	CAP1	Q01518	475 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	CACNB2	Q08289	660 aa	Predicted RBP	5.28	□□□□□ -1.56
COX11-208	ENST00000576084	IFRD2	Q12894	506 aa	Predicted RBP	5.28	□□□□□ -1.56
COX11-208	ENST00000576084	LONRF2	Q1L5Z9	754 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	SOGA3	Q5TF21	947 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	FAM26E	Q8N5C1	309 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	FNIP1	Q8TF40	1166 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	PWWP2A	Q96N64	755 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	ZFYVE21	Q9BQ24	234 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	JAM3	Q9BX67	310 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	ZNF652	Q9Y2D9	606 aa		5.28	□□□□□ -1.56
COX11-208	ENST00000576084	TRBV23-1	A0A0A0MS06	115 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	TCRBV5S2	A0A599	114 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	VMAC	Q2NL98	169 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	HABP4	Q5JVS0	413 aa	Known RBP	5.27	□□□□□ -1.57
COX11-208	ENST00000576084	LCE5A	Q5TCM9	118 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	LILRB2	Q8N423	598 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	SMARCC2	Q8TAQ2	1214 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	CHAMP1	Q96JM3	812 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	SRPK1	Q96SB4	655 aa	Known RBP	5.27	□□□□□ -1.57
COX11-208	ENST00000576084	AP5M1	Q9H0R1	490 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	OSBPL2	Q9H1P3	480 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	TRAF6	Q9Y4K3	522 aa		5.27	□□□□□ -1.57
COX11-208	ENST00000576084	HGS	O14964	777 aa	Predicted RBP	5.26	□□□□□ -1.57
COX11-208	ENST00000576084	TRIM13	O60858	407 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	CR1L	Q2VPA4	569 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	TCERG1L	Q5VWI1	586 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	STEAP3	Q658P3	488 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	MILR1	Q7Z6M3	343 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	SAPCD2	Q86UD0	394 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	FAM126B	Q8IXS8	530 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	IFNL3	Q8IZI9	196 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	ARRDC4	Q8NCT1	418 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	PUM2	Q8TB72	1066 aa	Known RBP eCLIP	5.26	□□□□□ -1.57
COX11-208	ENST00000576084	DRC1	Q96MC2	740 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	DHRS4	Q9BTZ2	278 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	KRTAP17-1	Q9BYP8	105 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	EPB41L1	Q9H4G0	881 aa		5.26	□□□□□ -1.57
COX11-208	ENST00000576084	SPATA6	Q9NWH7	488 aa	Predicted RBP	5.26	□□□□□ -1.57
COX11-208	ENST00000576084	CDK11A	Q9UQ88	783 aa	Predicted RBP	5.26	□□□□□ -1.57
COX11-208	ENST00000576084	COA3	Q9Y2R0	106 aa	Predicted RBP	5.26	□□□□□ -1.57
COX11-208	ENST00000576084	SUMO1	P63165	101 aa	Known RBP	5.25	□□□□□ -1.57
COX11-208	ENST00000576084	KIZ	Q2M2Z5	673 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	ETV3L	Q6ZN32	361 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	OTOP3	Q7RTS5	596 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	TMEM151B	Q8IW70	566 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	LINC00482	Q8N8I6	264 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	LINC01356	Q8N9X3	169 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	MARCH10	Q8NA82	808 aa	Predicted RBP	5.25	□□□□□ -1.57
COX11-208	ENST00000576084	PIP4K2C	Q8TBX8	421 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	DDX11	Q96FC9	970 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	KCNC2	Q96PR1	638 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	CDC6	Q99741	560 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	GORASP1	Q9BQQ3	440 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	SLC6A20	Q9NP91	592 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	WASF3	Q9UPY6	502 aa		5.25	□□□□□ -1.57
COX11-208	ENST00000576084	MRPS23	Q9Y3D9	190 aa	Known RBP	5.25	□□□□□ -1.57
COX11-208	ENST00000576084	WNT9A	O14904	365 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	DGKI	O75912	1065 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	SOD2	P04179	222 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	GRK2	P25098	689 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	GRK3	P35626	688 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	STAT5A	P42229	794 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	TTLL10	Q6ZVT0	673 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	MAMDC2	Q7Z304	686 aa	Predicted RBP	5.24	□□□□□ -1.57
COX11-208	ENST00000576084	ADGRG2	Q8IZP9	1017 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	ZNF526	Q8TF50	670 aa	Predicted RBP	5.24	□□□□□ -1.57
COX11-208	ENST00000576084	CLEC4D	Q8WXI8	215 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	PTPRN2	Q92932	1015 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	LNPK	Q9C0E8	428 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	PDGFD	Q9GZP0	370 aa	Predicted RBP	5.24	□□□□□ -1.57
COX11-208	ENST00000576084	SMOC1	Q9H4F8	434 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	IPPK	Q9H8X2	491 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	ASH2L	Q9UBL3	628 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	TELO2	Q9Y4R8	837 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	PCDHB4	Q9Y5E5	795 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084	PMF1-BGLAP	U3KQ54	211 aa		5.24	□□□□□ -1.57
COX11-208	ENST00000576084		A0A1B0GTL3	188 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	TCRBV5S4A2T	A0A5A2	114 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	SH3D21	A4FU49	640 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	NKRF	O15226	690 aa	Known RBP eCLIP	5.23	□□□□□ -1.57
COX11-208	ENST00000576084	LRG1	P02750	347 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	COL6A2	P12110	1019 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	CHRNA2	Q15822	529 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	C2orf27A	Q580R0	203 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	ZC3H12B	Q5HYM0	836 aa	Known RBP	5.23	□□□□□ -1.57
COX11-208	ENST00000576084	CYP4F22	Q6NT55	531 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	PROSER1	Q86XN7	944 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	RBM12B	Q8IXT5	1001 aa	Known RBP	5.23	□□□□□ -1.57
COX11-208	ENST00000576084	GSTCD	Q8NEC7	633 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	PCDH19	Q8TAB3	1148 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	SH3RF2	Q8TEC5	729 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	THAP3	Q8WTV1	239 aa	Predicted RBP	5.23	□□□□□ -1.57
COX11-208	ENST00000576084	UBXN4	Q92575	508 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	C11orf84	Q9BUA3	381 aa	Predicted RBP	5.23	□□□□□ -1.57
COX11-208	ENST00000576084	KANSL2	Q9H9L4	492 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	HSPBP1	Q9NZL4	362 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	MYOT	Q9UBF9	498 aa		5.23	□□□□□ -1.57
COX11-208	ENST00000576084	FAN1	Q9Y2M0	1017 aa		5.23	□□□□□ -1.57

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