RNA–Protein interactions for RNA: ENST00000575701.4

SRRM2-223, Transcript of serine/arginine repetitive matrix 2, human

TSL 3

Gene SRRM2, Length 860 nt, Biotype retained intron, Subcellular localisation Nucleus .

RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
SRRM2-223	ENST00000575701	CDHR1	Q96JP9	859 aa		28.99	■■■□□ 2.23
SRRM2-223	ENST00000575701	LBHD1	Q9BQE6	289 aa	Predicted RBP	28.99	■■■□□ 2.23
SRRM2-223	ENST00000575701		A0A1W2PPC1	479 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	SPATA31C2	B4DYI2	1134 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	GNA11	P29992	359 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	BMP8B	P34820	402 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	CLK2	P49760	499 aa	Known RBP	28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	CELF3	Q5SZQ8	465 aa	Known RBP	28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	SH3GLB2	Q9NR46	395 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	TPCN1	Q9ULQ1	816 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	LTBP2	Q14767	1821 aa		28.98	■■■□□ 2.23
SRRM2-223	ENST00000575701	PFKFB2	O60825	505 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	DEXI	O95424	95 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	GGPS1	O95749	300 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	MAGEA10	P43363	369 aa	Predicted RBP	28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	NEK4	P51957	841 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	FAAP100	Q0VG06	881 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	NEDD9	Q14511	834 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	DGKD	Q16760	1214 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	MYSM1	Q5VVJ2	828 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	FAM126B	Q8IXS8	530 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	FAM177A1	Q8N128	213 aa	Predicted RBP	28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	GPRASP2	Q96D09	838 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	ZFP91	Q96JP5	570 aa	Predicted RBP	28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	RTEL1	Q9NZ71	1219 aa		28.97	■■■□□ 2.23
SRRM2-223	ENST00000575701	SCN10A	Q9Y5Y9	1956 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	KIAA0355	O15063	1070 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	BICD2	Q8TD16	824 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	SENP7	Q9BQF6	1050 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	ANO3	Q9BYT9	981 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	MLXIP	Q9HAP2	919 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	TMEM39A	Q9NV64	488 aa		28.96	■■■□□ 2.23
SRRM2-223	ENST00000575701	GRIN2D	O15399	1336 aa		28.95	■■■□□ 2.23
SRRM2-223	ENST00000575701	PSMC6	P62333	389 aa		28.95	■■■□□ 2.22
SRRM2-223	ENST00000575701	SCRN1	Q12765	414 aa		28.95	■■■□□ 2.22
SRRM2-223	ENST00000575701	GIMAP8	Q8ND71	665 aa	Predicted RBP	28.95	■■■□□ 2.22
SRRM2-223	ENST00000575701	UBIAD1	Q9Y5Z9	338 aa		28.95	■■■□□ 2.22
SRRM2-223	ENST00000575701	MYH7B	A7E2Y1	1941 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	TRIM43B	A6NCK2	446 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	MAFG	O15525	162 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	HOXD8	P13378	290 aa	Predicted RBP	28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	SP2	Q02086	613 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	SEMA3F	Q13275	785 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	HABP4	Q5JVS0	413 aa	Known RBP	28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	SH3RF1	Q7Z6J0	888 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	REXO1	Q8N1G1	1221 aa	Known RBP	28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	TRIM43	Q96BQ3	446 aa	Predicted RBP	28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	SPATA33	Q96N06	139 aa		28.94	■■■□□ 2.22
SRRM2-223	ENST00000575701	PPFIA4	O75335	1185 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	CD4	P01730	458 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	SREBF1	P36956	1147 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	MDM2	Q00987	491 aa	Predicted RBP	28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	PTPN11	Q06124	597 aa	Predicted RBP	28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	NFRKB	Q6P4R8	1299 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	METTL7B	Q6UX53	244 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	KATNAL1	Q9BW62	490 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	TBX21	Q9UL17	535 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	STK36	Q9NRP7	1315 aa		28.93	■■■□□ 2.22
SRRM2-223	ENST00000575701	PPFIA3	O75145	1194 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	RAG1	P15918	1043 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	ITGB5	P18084	799 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	MTMR1	Q13613	665 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	HSDL1	Q3SXM5	330 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	C22orf23	Q9BZE7	217 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	UPF2	Q9HAU5	1272 aa	Known RBP	28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	JADE2	Q9NQC1	790 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	TMEM260	Q9NX78	707 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	VPS54	Q9P1Q0	977 aa		28.92	■■■□□ 2.22
SRRM2-223	ENST00000575701	RBM25	P49756	843 aa	Known RBP	28.91	■■■□□ 2.22
SRRM2-223	ENST00000575701	NBPF20	Q3BBV1	942 aa		28.91	■■■□□ 2.22
SRRM2-223	ENST00000575701	PGBD1	Q96JS3	809 aa		28.91	■■■□□ 2.22
SRRM2-223	ENST00000575701	UBE2O	Q9C0C9	1292 aa	Known RBP	28.91	■■■□□ 2.22
SRRM2-223	ENST00000575701	NOP56	O00567	594 aa	Known RBP	28.9	■■■□□ 2.22
SRRM2-223	ENST00000575701	SUPT20HL2	P0C7V6	817 aa		28.9	■■■□□ 2.22
SRRM2-223	ENST00000575701	JAKMIP3	Q5VZ66	844 aa		28.9	■■■□□ 2.22
SRRM2-223	ENST00000575701	MXRA8	Q9BRK3	442 aa		28.9	■■■□□ 2.22
SRRM2-223	ENST00000575701	F2	P00734	622 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	NLRP5	P59047	1200 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	ARHGAP4	P98171	946 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	ME3	Q16798	604 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	CYFIP1	Q7L576	1253 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	GTF3C6	Q969F1	213 aa		28.89	■■■□□ 2.22
SRRM2-223	ENST00000575701	B4GALT4	O60513	344 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	TIMP1	P01033	207 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	CEP55	Q53EZ4	464 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	FAM47C	Q5HY64	1035 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	GALNT17	Q6IS24	598 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	SESTD1	Q86VW0	696 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	KAT2B	Q92831	832 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	BAD	Q92934	168 aa		28.88	■■■□□ 2.21
SRRM2-223	ENST00000575701	SORBS3	O60504	671 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	CYP3A4	P08684	503 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	KCNA2	P16389	499 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	XBP1	P17861	261 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	NIPA1	Q7RTP0	329 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	IL27	Q8NEV9	243 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	WASF1	Q92558	559 aa		28.87	■■■□□ 2.21
SRRM2-223	ENST00000575701	ZNF76	P36508	570 aa		28.86	■■■□□ 2.21
SRRM2-223	ENST00000575701	TDH	Q8IZJ6	230 aa		28.86	■■■□□ 2.21
SRRM2-223	ENST00000575701	CRYGN	Q8WXF5	182 aa		28.86	■■■□□ 2.21

Retrieved 100 of 20,778 RNA–protein pairs in 157.1 ms