RNA–Protein interactions for RNA: ENST00000575599.5

RPAIN-216, Transcript of RPA interacting protein, humanhuman

TSL 2

Gene RPAIN, Length 1,359 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-216ENST00000575599 PDLIM7Q9NR12 457 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 POLR3EQ9NVU0 708 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 TPCN1Q9ULQ1 816 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 PCDHA6Q9UN73 950 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 PCDHA8Q9Y5H6 950 aa15.2■□□□□ 0.02
RPAIN-216ENST00000575599 DCDC2CA8MYV0 355 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 ARVCFO00192 962 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 STAM2O75886 525 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 CLTBP09497 229 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 UBA1P22314 1058 aaKnown RBP15.19■□□□□ 0.02
RPAIN-216ENST00000575599 MAGEA10P43363 369 aaPredicted RBP15.19■□□□□ 0.02
RPAIN-216ENST00000575599 PURAQ00577 322 aaKnown RBP15.19■□□□□ 0.02
RPAIN-216ENST00000575599 MDM2Q00987 491 aaPredicted RBP15.19■□□□□ 0.02
RPAIN-216ENST00000575599 ITGA7Q13683 1181 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 ANKRD1Q15327 319 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 KCNV1Q6PIU1 500 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 SH3RF1Q7Z6J0 888 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 TRIM22Q8IYM9 498 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 IL17RAQ96F46 866 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 SLKQ9H2G2 1235 aaPredicted RBP15.19■□□□□ 0.02
RPAIN-216ENST00000575599 EHMT1Q9H9B1 1298 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 TSHZ2Q9NRE2 1034 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 MROH7Q68CQ1 1323 aa15.19■□□□□ 0.02
RPAIN-216ENST00000575599 A6NJR5 290 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 GGPS1O95749 300 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 MMP3P08254 477 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 NEK4P51957 841 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 CHMP4BP1P59074 171 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 SSRP1Q08945 709 aaKnown RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 SCRN1Q12765 414 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 CPLX2Q6PUV4 134 aaKnown RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 ANKRD33Q7Z3H0 272 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 DHX37Q8IY37 1157 aaKnown RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 CCDC12Q8WUD4 166 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 TBC1D32Q96NH3 1257 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 INPP4AQ96PE3 977 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 MTG1Q9BT17 334 aaPredicted RBP15.18■□□□□ 0.02
RPAIN-216ENST00000575599 TMEM260Q9NX78 707 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 VPS54Q9P1Q0 977 aa15.18■□□□□ 0.02
RPAIN-216ENST00000575599 LTBP2Q14767 1821 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 TRIM43BA6NCK2 446 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 FIBPO43427 364 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 SP2Q02086 613 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 LAMC2Q13753 1193 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 XRRA1Q6P2D8 792 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 NLRX1Q86UT6 975 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 PPP1R13LQ8WUF5 828 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 EMID1Q96A84 441 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-216ENST00000575599 TRIM43Q96BQ3 446 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-216ENST00000575599 TOX2Q96NM4 488 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 LBHD1Q9BQE6 289 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-216ENST00000575599 ANO3Q9BYT9 981 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 GLT8D2Q9H1C3 349 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 ALDH8A1Q9H2A2 487 aaPredicted RBP15.17■□□□□ 0.02
RPAIN-216ENST00000575599 C6orf50Q9HD87 102 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 TMEM39AQ9NV64 488 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 MYH7BA7E2Y1 1941 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 GRIN2DO15399 1336 aa15.17■□□□□ 0.02
RPAIN-216ENST00000575599 TLR3O15455 904 aaKnown RBP15.16■□□□□ 0.02
RPAIN-216ENST00000575599 KPNA6O60684 536 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 TGFB3P10600 412 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 ICAM3P32942 547 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 CDK7P50613 346 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 FAAP100Q0VG06 881 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 SEMA3FQ13275 785 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 AP3B2Q13367 1082 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 FAM47CQ5HY64 1035 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 CELF3Q5SZQ8 465 aaKnown RBP15.16■□□□□ 0.02
RPAIN-216ENST00000575599 MYSM1Q5VVJ2 828 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 JAKMIP3Q5VZ66 844 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 FAM126BQ8IXS8 530 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 CCDC148Q8NFR7 591 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 PPTC7Q8NI37 304 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 SPATA33Q96N06 139 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 GDF15Q99988 308 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 MLXIPQ9HAP2 919 aa15.16■□□□□ 0.02
RPAIN-216ENST00000575599 DOCK5Q9H7D0 1870 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 ESYT2A0FGR8 921 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 SPATA31C2B4DYI2 1134 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 ADAMTS3O15072 1205 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 ATMINO43313 823 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 PFKFB2O60825 505 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 DTNBO60941 627 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 CDKL5O76039 1030 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 DEXIO95424 95 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 LARGE1O95461 756 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 FOSP01100 380 aaPredicted RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 ZNF286BP0CG31 522 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 GNA11P29992 359 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 RBM25P49756 843 aaKnown RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 CLK2P49760 499 aaKnown RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 DGKDQ16760 1214 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 HABP4Q5JVS0 413 aaKnown RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 TEX2Q8IWB9 1127 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 REXO1Q8N1G1 1221 aaKnown RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 SLC43A3Q8NBI5 491 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 UBE2OQ9C0C9 1292 aaKnown RBP15.15■□□□□ 0.02
RPAIN-216ENST00000575599 ZMYND12Q9H0C1 365 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 PKD2L1Q9P0L9 805 aa15.15■□□□□ 0.02
RPAIN-216ENST00000575599 SCN10AQ9Y5Y9 1956 aa15.15■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 49.8 ms