RNA–Protein interactions for RNA: ENST00000575338.1

SMG6-217, Transcript of SMG6, nonsense mediated mRNA decay factor, humanhuman

TSL 4

Gene SMG6, Length 546 nt, Biotype processed transcript, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG6-217ENST00000575338 ZBTB7AO95365 584 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CFBP00751 764 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 PLA2G4BP0C869 781 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 BCRP11274 1271 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 GAP43P17677 238 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 TRIM21P19474 475 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 FECHP22830 423 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CYLC1P35663 651 aaPredicted RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 ECE1P42892 770 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 OAZ1P54368 228 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 ETF1P62495 437 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 FKBP3Q00688 224 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 GHRHRQ02643 423 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 MAN2A1Q16706 1144 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 KIF4BQ2VIQ3 1234 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 HSP90AA4PQ58FG1 418 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 FAM26FQ5R3K3 315 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 NCAPH2Q6IBW4 605 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 XRRA1Q6P2D8 792 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CREBRFQ8IUR6 639 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 SPICE1Q8N0Z3 855 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 C17orf53Q8N3J3 647 aaPredicted RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 MB21D1Q8N884 522 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 SYT2Q8N9I0 419 aaPredicted RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 OR8K1Q8NGG5 319 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 ETNPPLQ8TBG4 499 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 ZNF592Q92610 1267 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CNOT6LQ96LI5 555 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 MED15Q96RN5 788 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 SLF1Q9BQI6 1058 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 NOC4LQ9BVI4 516 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 EDEM3Q9BZQ6 932 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 VPS16Q9H269 839 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 PICK1Q9NRD5 415 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 INTS13Q9NVM9 706 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 TRMT1Q9NXH9 659 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 MYO1AQ9UBC5 1043 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 SEL1LQ9UBV2 794 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CNOT7Q9UIV1 285 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 FAM184BQ9ULE4 1060 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 CCPG1Q9ULG6 757 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 KIAA1024Q9UPX6 916 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 BCS1LQ9Y276 419 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 PPP2R2CQ9Y2T4 447 aa7.56□□□□□ -1.2
SMG6-217ENST00000575338 LUC7L2Q9Y383 392 aaKnown RBP7.56□□□□□ -1.2
SMG6-217ENST00000575338 SBF1O95248 1867 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 COL11A1P12107 1806 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 A0A1W2PQJ5 194 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 NFKBIEO00221 500 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 CALUO43852 315 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 PPP1R12BO60237 982 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 KIF5CO60282 957 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 DKC1O60832 514 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG6-217ENST00000575338 GAS7O60861 476 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 TBCAO75347 108 aaKnown RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 EYA4O95677 639 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 SSBP05455 408 aaKnown RBP eCLIP7.55□□□□□ -1.2
SMG6-217ENST00000575338 RPL13P26373 211 aaKnown RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 EPS15P42566 896 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 KRT83P78385 493 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 EHHADHQ08426 723 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 RBL2Q08999 1139 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 TBC1D8BQ0IIM8 1120 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 STK4Q13043 487 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 COASYQ13057 564 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 PPP2R5CQ13362 524 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 ARID5BQ14865 1188 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 EDRF1Q3B7T1 1238 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 NBPF9Q3BBW0 867 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 SUPT20HL1Q3ZLR7 823 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 CEP55Q53EZ4 464 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 LRCH2Q5VUJ6 765 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 MIGA2Q7L4E1 593 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 DYMQ7RTS9 669 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 GPBP1Q86WP2 473 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 LDHDQ86WU2 507 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 FMNL3Q8IVF7 1028 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 MICALL2Q8IY33 904 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 EHBP1Q8NDI1 1231 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 SLC17A8Q8NDX2 589 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 ACER1Q8TDN7 264 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 ERO1AQ96HE7 468 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 PCMTD1Q96MG8 357 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 ERGIC2Q96RQ1 377 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 RIT2Q99578 217 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 WDR18Q9BV38 432 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 TIPINQ9BVW5 301 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 TEKT3Q9BXF9 490 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 PDGFDQ9GZP0 370 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 SLC39A2Q9NP94 309 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 LUC7LQ9NQ29 371 aaKnown RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 ABHD10Q9NUJ1 306 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 TAB2Q9NYJ8 693 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 PPP1R1BQ9UD71 204 aaPredicted RBP7.55□□□□□ -1.2
SMG6-217ENST00000575338 CAPN11Q9UMQ6 739 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 MAPK8IP1Q9UQF2 711 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 COL4A3BPQ9Y5P4 624 aa7.55□□□□□ -1.2
SMG6-217ENST00000575338 MYPNQ86TC9 1320 aa7.54□□□□□ -1.2
SMG6-217ENST00000575338 WDR81Q562E7 1941 aa7.54□□□□□ -1.2
SMG6-217ENST00000575338 SMCHD1A6NHR9 2005 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 19.3 ms