RNA–Protein interactions for RNA: ENST00000574545.1

SCARF1-208, Transcript of scavenger receptor class F member 1, humanhuman

TSL 1 (best)

Gene SCARF1, Length 894 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SCARF1-208ENST00000574545 IL23AQ9NPF7 189 aa22.68■■□□□ 1.22
SCARF1-208ENST00000574545 SPATA31C2B4DYI2 1134 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 HAS3O00219 553 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 PPFIA4O75335 1185 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 GGPS1O95749 300 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 ACRP10323 421 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 CCL23P55773 120 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 PCNX4Q63HM2 1172 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 TYW1BQ6NUM6 668 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 Q6ZUG5 572 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 ZNF365Q70YC5 407 aa22.67■■□□□ 1.22
SCARF1-208ENST00000574545 FAM47CQ5HY64 1035 aa22.66■■□□□ 1.22
SCARF1-208ENST00000574545 WWC2Q6AWC2 1192 aa22.66■■□□□ 1.22
SCARF1-208ENST00000574545 XRRA1Q6P2D8 792 aa22.66■■□□□ 1.22
SCARF1-208ENST00000574545 RTEL1Q9NZ71 1219 aa22.66■■□□□ 1.22
SCARF1-208ENST00000574545 GOLGA8AA7E2F4 631 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 GOLGA8BA8MQT2 603 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 F2P00734 622 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 RPS6KB1P23443 525 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 APOBRQ0VD83 1088 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 GNPTABQ3T906 1256 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 PSRC1Q6PGN9 363 aaPredicted RBP22.65■■□□□ 1.22
SCARF1-208ENST00000574545 BLOC1S2Q6QNY1 142 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 SCLYQ96I15 445 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 SPATA33Q96N06 139 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 USP26Q9BXU7 913 aa22.65■■□□□ 1.22
SCARF1-208ENST00000574545 V9GY48 417 aaPredicted RBP22.65■■□□□ 1.22
SCARF1-208ENST00000574545 SORBS3O60504 671 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 ADD1P35611 737 aaKnown RBP22.64■■□□□ 1.21
SCARF1-208ENST00000574545 PSEN2P49810 448 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 UBE2SQ16763 222 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 GDF6Q6KF10 455 aaPredicted RBP22.64■■□□□ 1.21
SCARF1-208ENST00000574545 HEATR3Q7Z4Q2 680 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 HERVK_113Q902F9 699 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 BRF1Q92994 677 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 C16orf70Q9BSU1 422 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 GTF2IRD1Q9UHL9 959 aa22.64■■□□□ 1.21
SCARF1-208ENST00000574545 NID2Q14112 1375 aa22.63■■□□□ 1.21
SCARF1-208ENST00000574545 HSFX4A0A1B0GTS1 333 aaPredicted RBP22.63■■□□□ 1.21
SCARF1-208ENST00000574545 HSFX3A0A1B0GWH4 333 aaPredicted RBP22.63■■□□□ 1.21
SCARF1-208ENST00000574545 FIBPO43427 364 aa22.63■■□□□ 1.21
SCARF1-208ENST00000574545 SENP7Q9BQF6 1050 aa22.63■■□□□ 1.21
SCARF1-208ENST00000574545 MLXIPQ9HAP2 919 aa22.63■■□□□ 1.21
SCARF1-208ENST00000574545 HDAC6Q9UBN7 1215 aa22.63■■□□□ 1.21
SCARF1-208ENST00000574545 PITPNM1O00562 1244 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 FGBP02675 491 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 ZNF286BP0CG31 522 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 PSMA5P28066 241 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 EVCP57679 992 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 NEDD9Q14511 834 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 MFSD10Q14728 455 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 PTGISQ16647 500 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 KIAA0753Q2KHM9 967 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 METTL7BQ6UX53 244 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 TEX2Q8IWB9 1127 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 GUCD1Q96NT3 240 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 KATNAL1Q9BW62 490 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 TTYH1Q9H313 450 aaPredicted RBP22.62■■□□□ 1.21
SCARF1-208ENST00000574545 RIC8AQ9NPQ8 531 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 PCDHA6Q9UN73 950 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 PCDHA8Q9Y5H6 950 aa22.62■■□□□ 1.21
SCARF1-208ENST00000574545 hCG_1984214I3L0E3 225 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 STXBP3O00186 592 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 ITGB5P18084 799 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 METAP2P50579 478 aaKnown RBP eCLIP22.61■■□□□ 1.21
SCARF1-208ENST00000574545 CHMP4BP1P59074 171 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 FGD1P98174 961 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 PPP1R18Q6NYC8 613 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 CYFIP1Q7L576 1253 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 RPUSD2Q8IZ73 545 aaKnown RBP22.61■■□□□ 1.21
SCARF1-208ENST00000574545 ZNF713Q8N859 430 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-208ENST00000574545 SEMA6BQ9H3T3 888 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 ZSWIM6Q9HCJ5 1215 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 BARHL2Q9NY43 387 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 CXXC1Q9P0U4 656 aaPredicted RBP22.61■■□□□ 1.21
SCARF1-208ENST00000574545 TELO2Q9Y4R8 837 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 UBIAD1Q9Y5Z9 338 aa22.61■■□□□ 1.21
SCARF1-208ENST00000574545 ATP9AO75110 1047 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 IQCF3P0C7M6 154 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 RBL2Q08999 1139 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 HIC1Q14526 733 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 ZNF697Q5TEC3 545 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 NLRX1Q86UT6 975 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 DHX38Q92620 1227 aaKnown RBP22.6■■□□□ 1.21
SCARF1-208ENST00000574545 GPRASP2Q96D09 838 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 GPR20Q99678 358 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 ALG1Q9BT22 464 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 STXBP5LQ9Y2K9 1186 aa22.6■■□□□ 1.21
SCARF1-208ENST00000574545 CCDC196A0A1B0GTZ2 297 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 SPDYE3A6NKU9 549 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 CLK2P49760 499 aaKnown RBP22.59■■□□□ 1.21
SCARF1-208ENST00000574545 NAPAP54920 295 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 NTRK3Q16288 839 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 PFKFB3Q16875 520 aaPredicted RBP22.59■■□□□ 1.21
SCARF1-208ENST00000574545 RUFY3Q7L099 469 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 C7orf31Q8N865 590 aa22.59■■□□□ 1.21
SCARF1-208ENST00000574545 TRIP12Q14669 1992 aaPredicted RBP22.59■■□□□ 1.21
SCARF1-208ENST00000574545 TMEM265A0A087WTH1 108 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 GRXCR1A8MXD5 290 aa22.58■■□□□ 1.21
SCARF1-208ENST00000574545 LGALS2P05162 132 aa22.58■■□□□ 1.21
Retrieved 100 of 20,778 RNA–protein pairs in 17.7 ms