RNA–Protein interactions for RNA: ENST00000574304.5

CDC27-216, Transcript of cell division cycle 27, humanhuman

TSL 5

Gene CDC27, Length 514 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDC27-216ENST00000574304 ZNF652Q9Y2D9 606 aa7.26□□□□□ -1.25
CDC27-216ENST00000574304 AQP7O14520 342 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 ZSCAN22P10073 491 aaPredicted RBP7.25□□□□□ -1.25
CDC27-216ENST00000574304 GABREP78334 506 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 CACNB2Q08289 660 aaPredicted RBP7.25□□□□□ -1.25
CDC27-216ENST00000574304 KRTAP19-4Q3LI73 84 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 C2orf27AQ580R0 203 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 EMC4Q5J8M3 183 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 TCERG1LQ5VWI1 586 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 ETV3LQ6ZN32 361 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 MIB1Q86YT6 1006 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 ZSWIM2Q8NEG5 633 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 ALG1Q9BT22 464 aa7.25□□□□□ -1.25
CDC27-216ENST00000574304 KRIT1O00522 736 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 TADA3O75528 432 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 SOD2P04179 222 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 AFF3P51826 1226 aaKnown RBP7.24□□□□□ -1.25
CDC27-216ENST00000574304 LCNL1Q6ZST4 164 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 SIAH1Q8IUQ4 282 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 NLGN1Q8N2Q7 840 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 SMARCC2Q8TAQ2 1214 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 PIP4K2CQ8TBX8 421 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 PCDHB4Q9Y5E5 795 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 PTCH2Q9Y6C5 1203 aa7.24□□□□□ -1.25
CDC27-216ENST00000574304 FAM47E-STBD1D6RA91 191 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 MAFKO60675 156 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 MTDHQ86UE4 582 aaKnown RBP7.23□□□□□ -1.25
CDC27-216ENST00000574304 FAM126BQ8IXS8 530 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 KCNJ15Q99712 375 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 IPPKQ9H8X2 491 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 SLC6A20Q9NP91 592 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 MYOTQ9UBF9 498 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 PMF1-BGLAPU3KQ54 211 aa7.23□□□□□ -1.25
CDC27-216ENST00000574304 CCDC163A0A0D9SF12 145 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 TCRBV5S2A0A599 114 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 PLA2G1BP04054 148 aaKnown RBP7.22□□□□□ -1.25
CDC27-216ENST00000574304 C8BP07358 591 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 CYP2C8P10632 490 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 GNAT1P11488 350 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 COL6A2P12110 1019 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 SPIRE1Q08AE8 756 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 CYP4F22Q6NT55 531 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 OTOP3Q7RTS5 596 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 ARRDC4Q8NCT1 418 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 PHOSPHO1Q8TCT1 267 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 YIPF4Q9BSR8 244 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 SMOC1Q9H4F8 434 aa7.22□□□□□ -1.25
CDC27-216ENST00000574304 NAT1P18440 290 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 STAT5AP42229 794 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 GUCY1A3Q02108 690 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 PAK1Q13153 545 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 CD300LDQ6UXZ3 194 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 SPOCD1Q6ZMY3 1216 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 ZC3H18Q86VM9 953 aaKnown RBP7.21□□□□□ -1.26
CDC27-216ENST00000574304 FAM26EQ8N5C1 309 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 FNIP1Q8TF40 1166 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 DDX11Q96FC9 970 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 PIF1Q9H611 641 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 NDOR1Q9UHB4 597 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 PCDHA8Q9Y5H6 950 aa7.21□□□□□ -1.26
CDC27-216ENST00000574304 SLC27A2O14975 620 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 HTRA3P83110 453 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 CAP1Q01518 475 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 VMACQ2NL98 169 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 HABP4Q5JVS0 413 aaKnown RBP7.2□□□□□ -1.26
CDC27-216ENST00000574304 NOX5Q96PH1 765 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 SLC52A2Q9HAB3 445 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 PCDH18Q9HCL0 1135 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 ASH2LQ9UBL3 628 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 PCDHA9Q9Y5H5 950 aa7.2□□□□□ -1.26
CDC27-216ENST00000574304 ARVCFO00192 962 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 NKRFO15226 690 aaKnown RBP eCLIP7.19□□□□□ -1.26
CDC27-216ENST00000574304 EFCAB14O75071 495 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 TRIM48Q8IWZ4 208 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 GSTCDQ8NEC7 633 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 PCDH19Q8TAB3 1148 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 UHMK1Q8TAS1 419 aaKnown RBP7.19□□□□□ -1.26
CDC27-216ENST00000574304 SH3TC2Q8TF17 1288 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 TOE1Q96GM8 510 aaKnown RBP7.19□□□□□ -1.26
CDC27-216ENST00000574304 GORASP1Q9BQQ3 440 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 NGRNQ9NPE2 291 aaKnown RBP7.19□□□□□ -1.26
CDC27-216ENST00000574304 DTLQ9NZJ0 730 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 SFMBT1Q9UHJ3 866 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 NUB1Q9Y5A7 615 aa7.19□□□□□ -1.26
CDC27-216ENST00000574304 FFAR3O14843 346 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 WNT9AO14904 365 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 CRTAMO95727 393 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 NKX3-2P78367 333 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 SQSTM1Q13501 440 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 CR1LQ2VPA4 569 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 VWA3BQ502W6 1294 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 TRIM61Q5EBN2 209 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 LINC00482Q8N8I6 264 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 LINC01356Q8N9X3 169 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 SLC7A14Q8TBB6 771 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 FBXW5Q969U6 566 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 SYT3Q9BQG1 590 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 MRPL4Q9BYD3 311 aaKnown RBP7.18□□□□□ -1.26
CDC27-216ENST00000574304 KANSL2Q9H9L4 492 aa7.18□□□□□ -1.26
CDC27-216ENST00000574304 DSEQ9UL01 958 aa7.18□□□□□ -1.26
Retrieved 100 of 20,778 RNA–protein pairs in 35.6 ms