RNA–Protein interactions for RNA: ENST00000573955.1

USP43-204, Transcript of ubiquitin specific peptidase 43, humanhuman

TSL 1 (best)

Gene USP43, Length 2,641 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP43-204ENST00000573955 KRT31Q15323 416 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 ECM1Q16610 540 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 TBC1D10BQ4KMP7 808 aaPredicted RBP17.79■□□□□ 0.44
USP43-204ENST00000573955 PRAMEF18Q5VWM3 479 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 ADD3Q9UEY8 706 aaKnown RBP17.79■□□□□ 0.44
USP43-204ENST00000573955 PCDHA12Q9UN75 941 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 SMCHD1A6NHR9 2005 aa17.79■□□□□ 0.44
USP43-204ENST00000573955 RHOBTB3O94955 611 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 SSR1P43307 286 aaKnown RBP17.78■□□□□ 0.44
USP43-204ENST00000573955 PPP2R5AQ15172 486 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 PTPN14Q15678 1187 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 FCHSD1Q86WN1 690 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 CUEDC2Q9H467 287 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 STAT3P40763 770 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 TBX2Q13207 712 aaPredicted RBP17.78■□□□□ 0.44
USP43-204ENST00000573955 KCNB1Q14721 858 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 PRR16Q569H4 304 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 SV2BQ7L1I2 683 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 LARP4BQ92615 738 aaKnown RBP17.78■□□□□ 0.44
USP43-204ENST00000573955 TRIM47Q96LD4 638 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 SLC39A2Q9NP94 309 aa17.78■□□□□ 0.44
USP43-204ENST00000573955 COL2A1P02458 1487 aaPredicted RBP17.78■□□□□ 0.44
USP43-204ENST00000573955 MYMKA6NI61 221 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 KCNJ18B7U540 433 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 PES1O00541 588 aaKnown RBP17.77■□□□□ 0.44
USP43-204ENST00000573955 N4BP3O15049 544 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 SSBP05455 408 aaKnown RBP eCLIP17.77■□□□□ 0.44
USP43-204ENST00000573955 ARHGAP4P98171 946 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 KCNJ12Q14500 433 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 GIMAP8Q8ND71 665 aaPredicted RBP17.77■□□□□ 0.44
USP43-204ENST00000573955 TMX2Q9Y320 296 aa17.77■□□□□ 0.44
USP43-204ENST00000573955 SPDYE3A6NKU9 549 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 OPLAHO14841 1288 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 IDEP14735 1019 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 CLCN6P51797 869 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 FILIP1LQ4L180 1135 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 MMS22LQ6ZRQ5 1243 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 ARHGAP27Q6ZUM4 889 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 TC2NQ8N9U0 490 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 FHDC1Q9C0D6 1143 aaPredicted RBP17.77■□□□□ 0.43
USP43-204ENST00000573955 GOPCQ9HD26 462 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 FBXO28Q9NVF7 368 aa17.77■□□□□ 0.43
USP43-204ENST00000573955 PSMA7O14818 248 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 MYL1P05976 194 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 AMPD3Q01432 767 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 BIRC2Q13490 618 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 STIM1Q13586 685 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 TCP11X2Q5H9J9 407 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 TBC1D5Q92609 795 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 PPP1R13BQ96KQ4 1090 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 C7orf25Q9BPX7 421 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 ZNF541Q9H0D2 1346 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 BRCA1P38398 1863 aaKnown RBP17.76■□□□□ 0.43
USP43-204ENST00000573955 GCFC2P16383 781 aaKnown RBP17.76■□□□□ 0.43
USP43-204ENST00000573955 PDIA5Q14554 519 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 RASA3Q14644 834 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 DLK2Q6UY11 383 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 CCDC47Q96A33 483 aaKnown RBP17.76■□□□□ 0.43
USP43-204ENST00000573955 CTAGE1Q96RT6 745 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 SRRTQ9BXP5 876 aaKnown RBP17.76■□□□□ 0.43
USP43-204ENST00000573955 MAGEF1Q9HAY2 307 aa17.76■□□□□ 0.43
USP43-204ENST00000573955 CFBP00751 764 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 IVLP07476 585 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 CAP2P40123 477 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 GMPSP49915 693 aaPredicted RBP17.75■□□□□ 0.43
USP43-204ENST00000573955 RBL2Q08999 1139 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 DGKZQ13574 1117 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 RAD54LQ92698 747 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 BAG1Q99933 345 aaPredicted RBP17.75■□□□□ 0.43
USP43-204ENST00000573955 GLT8D2Q9H1C3 349 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 UBXN2AP68543 259 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 BTNL9Q6UXG8 535 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 NYAP1Q6ZVC0 841 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 TMEM139Q8IV31 216 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 CYP2W1Q8TAV3 490 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 CALR3Q96L12 384 aaKnown RBP17.75■□□□□ 0.43
USP43-204ENST00000573955 FER1L6Q2WGJ9 1857 aa17.75■□□□□ 0.43
USP43-204ENST00000573955 COPB1P53618 953 aaKnown RBP17.74■□□□□ 0.43
USP43-204ENST00000573955 SLC30A10Q6XR72 485 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 IRF2BP1Q8IU81 584 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 KIAA0895Q8NCT3 520 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 VPS33BQ9H267 617 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 STK17AQ9UEE5 414 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 CD2APQ9Y5K6 639 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 POTEB3A0JP26 581 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 POTECB2RU33 542 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 E9PMD0 336 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 FAM86B1E9PN63 330 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 KIF3CO14782 793 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 FAM86B2P0C5J1 330 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 AP3B2Q13367 1082 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 POTEBQ6S5H4 581 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 FAM83AQ86UY5 434 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 PPFIBP1Q86W92 1011 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 MICALL2Q8IY33 904 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 LIMA1Q9UHB6 759 aaKnown RBP17.74■□□□□ 0.43
USP43-204ENST00000573955 KIAA1024Q9UPX6 916 aa17.74■□□□□ 0.43
USP43-204ENST00000573955 EIF3CLB5ME19 914 aaKnown RBP17.73■□□□□ 0.43
USP43-204ENST00000573955 ACTN2P35609 894 aa17.73■□□□□ 0.43
USP43-204ENST00000573955 USP11P51784 963 aa17.73■□□□□ 0.43
Retrieved 100 of 20,778 RNA–protein pairs in 15.4 ms