RNA–Protein interactions for RNA: ENST00000573936.5

CHD3-216, Transcript of chromodomain helicase DNA binding protein 3, humanhuman

TSL 3

Gene CHD3, Length 749 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHD3-216ENST00000573936 C6orf222P0C671 652 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 FDPSP14324 419 aaKnown RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 CST5P28325 142 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 ICAM3P32942 547 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 SREBF1P36956 1147 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 MRPS9P82933 396 aaKnown RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 GJC2Q5T442 439 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 CCDC62Q6P9F0 684 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 FAM184AQ8NB25 1140 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 KLHDC9Q8NEP7 349 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 OR6J1Q8NGC5 347 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 IL31RAQ8NI17 732 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 TMX3Q96JJ7 454 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 CDHR1Q96JP9 859 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 INPP4AQ96PE3 977 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 PHF20Q9BVI0 1012 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 COL25A1Q9BXS0 654 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 SENP6Q9GZR1 1112 aaPredicted RBP12.59□□□□□ -0.39
CHD3-216ENST00000573936 BRMS1Q9HCU9 246 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 TMEM260Q9NX78 707 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 KIF3AQ9Y496 699 aa12.59□□□□□ -0.39
CHD3-216ENST00000573936 CDH23Q9H251 3354 aa12.58□□□□□ -0.39
CHD3-216ENST00000573936 ADCY6O43306 1168 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 FIBPO43427 364 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 JAK2O60674 1132 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 GH1P01241 217 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 ZNF76P36508 570 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 CPT1AP50416 773 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 ST3GAL1Q11201 340 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 LY6KQ17RY6 165 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 GNASQ5JWF2 1037 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 LENG1Q96BZ8 264 aaPredicted RBP12.58□□□□□ -0.4
CHD3-216ENST00000573936 GPRASP2Q96D09 838 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 FAM161BQ96MY7 647 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 AIFM3Q96NN9 605 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 RTEL1Q9NZ71 1219 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 DDX41Q9UJV9 622 aaKnown RBP12.58□□□□□ -0.4
CHD3-216ENST00000573936 ZSCAN21Q9Y5A6 473 aaPredicted RBP12.58□□□□□ -0.4
CHD3-216ENST00000573936 UBIAD1Q9Y5Z9 338 aa12.58□□□□□ -0.4
CHD3-216ENST00000573936 LRRC37A2A6NM11 1700 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 SPATA31C2B4DYI2 1134 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 KPNA6O60684 536 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 CABYRO75952 493 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 RGS20O76081 388 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 ARIH2O95376 493 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 CYP3A4P08684 503 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 ATN1P54259 1190 aaPredicted RBP12.57□□□□□ -0.4
CHD3-216ENST00000573936 ARHGAP4P98171 946 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 LAMC2Q13753 1193 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 NEDD9Q14511 834 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 KCNA10Q16322 511 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 FSCN1Q16658 493 aaKnown RBP12.57□□□□□ -0.4
CHD3-216ENST00000573936 ZNF697Q5TEC3 545 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 FAM109BQ6ICB4 259 aaPredicted RBP12.57□□□□□ -0.4
CHD3-216ENST00000573936 NIPA1Q7RTP0 329 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 KRT25Q7Z3Z0 450 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 DHX37Q8IY37 1157 aaKnown RBP12.57□□□□□ -0.4
CHD3-216ENST00000573936 GIMAP8Q8ND71 665 aaPredicted RBP12.57□□□□□ -0.4
CHD3-216ENST00000573936 PGBD1Q96JS3 809 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 SENP7Q9BQF6 1050 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 MXRA8Q9BRK3 442 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 JADE2Q9NQC1 790 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 TSHZ2Q9NRE2 1034 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 POLR3EQ9NVU0 708 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 KCNJ14Q9UNX9 436 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 PHF24Q9UPV7 400 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 PRUNE2Q8WUY3 3088 aa12.57□□□□□ -0.4
CHD3-216ENST00000573936 LTBP2Q14767 1821 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 VCANP13611 3396 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 CCDC194A0A1B0GVG4 234 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 M0R2N6 131 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 CD2BP2O95400 341 aaKnown RBP12.56□□□□□ -0.4
CHD3-216ENST00000573936 KRT2P35908 639 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 USP11P51784 963 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 MTMR1Q13613 665 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 SAFBQ15424 915 aaKnown RBP eCLIP12.56□□□□□ -0.4
CHD3-216ENST00000573936 CEP55Q53EZ4 464 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 CELF3Q5SZQ8 465 aaKnown RBP12.56□□□□□ -0.4
CHD3-216ENST00000573936 CCSAPQ6IQ19 270 aaPredicted RBP12.56□□□□□ -0.4
CHD3-216ENST00000573936 COPS5Q92905 334 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 EMID1Q96A84 441 aaPredicted RBP12.56□□□□□ -0.4
CHD3-216ENST00000573936 C8orf76Q96K31 380 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 MLXIPQ9HAP2 919 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 MCM3APO60318 1980 aa12.56□□□□□ -0.4
CHD3-216ENST00000573936 A6NJR5 290 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 CTAGE5O15320 804 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 GGPS1O95749 300 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 MMP1P03956 469 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 ASGR1P07306 291 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 ITGB5P18084 799 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 CIITAP33076 1130 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 ACLYP53396 1101 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 BEX3Q00994 111 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 ARHGAP1Q07960 439 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 NONOQ15233 471 aaKnown RBP eCLIP12.55□□□□□ -0.4
CHD3-216ENST00000573936 NPY5RQ15761 445 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 TMEM63BQ5T3F8 832 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 RASGRP4Q8TDF6 673 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 SNX21Q969T3 373 aa12.55□□□□□ -0.4
CHD3-216ENST00000573936 VTI1AQ96AJ9 217 aa12.55□□□□□ -0.4
Retrieved 100 of 20,778 RNA–protein pairs in 12.3 ms