RNA–Protein interactions for RNA: ENST00000573903.1

CCDC40-210, Transcript of coiled-coil domain containing 40, humanhuman

TSL 4

Gene CCDC40, Length 561 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC40-210ENST00000573903 GNPTABQ3T906 1256 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 STOX1Q6ZVD7 989 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 NCOA7Q8NI08 942 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 MTMR8Q96EF0 704 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 MLXIPQ9HAP2 919 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 MTCH2Q9Y6C9 303 aa14.12□□□□□ -0.15
CCDC40-210ENST00000573903 ABHD14A-ACY1A0A1B0GW23 586 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 HAS3O00219 553 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 NOP56O00567 594 aaKnown RBP14.11□□□□□ -0.15
CCDC40-210ENST00000573903 SORBS3O60504 671 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 PPP1R11O60927 126 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-210ENST00000573903 POU3F3P20264 500 aaPredicted RBP14.11□□□□□ -0.15
CCDC40-210ENST00000573903 IKBKEQ14164 716 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 CELF3Q5SZQ8 465 aaKnown RBP14.11□□□□□ -0.15
CCDC40-210ENST00000573903 MYSM1Q5VVJ2 828 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 VSIG10LQ86VR7 867 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 FCHSD1Q86WN1 690 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 DHX38Q92620 1227 aaKnown RBP14.11□□□□□ -0.15
CCDC40-210ENST00000573903 CTAGE1Q96RT6 745 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 PIGSQ96S52 555 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 IL25Q9H293 177 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 COG5Q9UP83 839 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 EMSYQ7Z589 1322 aa14.11□□□□□ -0.15
CCDC40-210ENST00000573903 PNMA6FA0A0J9YX94 578 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 CXCL10P02778 98 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 CYP21A2P08686 494 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 HOXD8P13378 290 aaPredicted RBP14.1□□□□□ -0.15
CCDC40-210ENST00000573903 GSPT1P15170 499 aaKnown RBP14.1□□□□□ -0.15
CCDC40-210ENST00000573903 UBA1P22314 1058 aaKnown RBP14.1□□□□□ -0.15
CCDC40-210ENST00000573903 HSDL1Q3SXM5 330 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 CATIPQ7Z7H3 387 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 RIOX1Q9H6W3 641 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 CHD9Q3L8U1 2897 aa14.1□□□□□ -0.15
CCDC40-210ENST00000573903 SPTBN5Q9NRC6 3674 aaKnown RBP14.09□□□□□ -0.15
CCDC40-210ENST00000573903 C17orf102A2RUQ5 167 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 EPOPA6NHQ4 379 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 NBNO60934 754 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 STAM2O75886 525 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 RGS20O76081 388 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 DEFB103AP81534 67 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 GRB10Q13322 594 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 ZNF618Q5T7W0 954 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 CENPQQ7L2Z9 268 aaPredicted RBP14.09□□□□□ -0.15
CCDC40-210ENST00000573903 IL31RAQ8NI17 732 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 CUL5Q93034 780 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 RAD9AQ99638 391 aa14.09□□□□□ -0.15
CCDC40-210ENST00000573903 TCF20Q9UGU0 1960 aaKnown RBP14.09□□□□□ -0.15
CCDC40-210ENST00000573903 E7EWF7 191 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 LGR5O75473 907 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 ARHGEF15O94989 841 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 GJB5O95377 273 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 CHMLP26374 656 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 PDE4AP27815 886 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 THPOP40225 353 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 TFF2Q03403 129 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 NEDD9Q14511 834 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 CTCFLQ8NI51 663 aaPredicted RBP14.08□□□□□ -0.16
CCDC40-210ENST00000573903 ATP6V0A1Q93050 837 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 TGS1Q96RS0 853 aaKnown RBP14.08□□□□□ -0.16
CCDC40-210ENST00000573903 SEC63Q9UGP8 760 aaKnown RBP14.08□□□□□ -0.16
CCDC40-210ENST00000573903 SIP14410 1827 aa14.08□□□□□ -0.16
CCDC40-210ENST00000573903 CHD7Q9P2D1 2997 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 PRRC2BQ5JSZ5 2229 aaKnown RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 LCHNA4D1U4 455 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 RSPH10B2B2RC85 870 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 H3BRB1 525 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 FIBPO43427 364 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 AMHP03971 560 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 LGALS2P05162 132 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 RSPH10BP0C881 870 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 GNAT1P11488 350 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 KIF5BP33176 963 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 KCNQ1P51787 676 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 ZNF200P98182 395 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 PTH1RQ03431 593 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 TROAPQ12815 778 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 GPNMBQ14956 572 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 TRIM71Q2Q1W2 868 aaKnown RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 KRT40Q6A162 431 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 FAM117BQ6P1L5 589 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 CASC1Q6TDU7 716 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 TMCO2Q7Z6W1 182 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 SERINC5Q86VE9 423 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 SMARCC2Q8TAQ2 1214 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 GDPD5Q8WTR4 605 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 PIBF1Q8WXW3 757 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 HLA-CQ95604 372 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 RRP36Q96EU6 259 aaKnown RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 ZFP91Q96JP5 570 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 C16orf70Q9BSU1 422 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 USP26Q9BXU7 913 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 TUT1Q9H6E5 874 aaKnown RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 LMCD1Q9NZU5 365 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 ZNF215Q9UL58 517 aaPredicted RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 MTUS1Q9ULD2 1270 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 BAZ2BQ9UIF8 2168 aaKnown RBP14.07□□□□□ -0.16
CCDC40-210ENST00000573903 MICAL3Q7RTP6 2002 aa14.07□□□□□ -0.16
CCDC40-210ENST00000573903 CYTH3O43739 400 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 DDAH1O94760 285 aa14.06□□□□□ -0.16
CCDC40-210ENST00000573903 SMIM10L2AP0DMW4 78 aa14.06□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 40 ms