RNA–Protein interactions for RNA: ENST00000573716.1

PRPF8-208, Transcript of pre-mRNA processing factor 8, humanhuman

TSL 2

Gene PRPF8, Length 542 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF8-208ENST00000573716 MFSD14AQ96MC6 490 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 SAMD11Q96NU1 681 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 UPF3BQ9BZI7 483 aaKnown RBP14.28□□□□□ -0.12
PRPF8-208ENST00000573716 UBA5Q9GZZ9 404 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 KCNH6Q9H252 994 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 NSUN3Q9H649 340 aaKnown RBP14.28□□□□□ -0.12
PRPF8-208ENST00000573716 PRKAG3Q9UGI9 489 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 ANAPC4Q9UJX5 808 aa14.28□□□□□ -0.12
PRPF8-208ENST00000573716 H3BNC9 293 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 IRS1P35568 1242 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 HAND2P61296 217 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 HTRA4P83105 476 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-208ENST00000573716 C20orf194Q5TEA3 1177 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 RPAINQ86UA6 219 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 PI4K2BQ8TCG2 481 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 SP7Q8TDD2 431 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-208ENST00000573716 SYTL5Q8TDW5 730 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-208ENST00000573716 OTUD7AQ8TE49 926 aaPredicted RBP14.27□□□□□ -0.13
PRPF8-208ENST00000573716 DCTPP1Q9H773 170 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 COL20A1Q9P218 1284 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 MUTYHQ9UIF7 546 aa14.27□□□□□ -0.13
PRPF8-208ENST00000573716 DDX41Q9UJV9 622 aaKnown RBP14.27□□□□□ -0.13
PRPF8-208ENST00000573716 ZNF318Q5VUA4 2279 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 ABCB11O95342 1321 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 DHX16O60231 1041 aaKnown RBP14.26□□□□□ -0.13
PRPF8-208ENST00000573716 F2P00734 622 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 CTSHP09668 335 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 CTNNB1P35222 781 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 LAMC2Q13753 1193 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 HIC1Q14526 733 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 CDC37Q16543 378 aaPredicted RBP14.26□□□□□ -0.13
PRPF8-208ENST00000573716 FBXO11Q86XK2 927 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 RGS22Q8NE09 1264 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 PPTC7Q8NI37 304 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 SEPT8Q92599 483 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 IWS1Q96ST2 819 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 PHOX2BQ99453 314 aa14.26□□□□□ -0.13
PRPF8-208ENST00000573716 RALGAPA2Q2PPJ7 1873 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 C19orf67A6NJJ6 358 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 HAS3O00219 553 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 MYCLP12524 364 aaPredicted RBP14.25□□□□□ -0.13
PRPF8-208ENST00000573716 PLEKHG4Q58EX7 1191 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 SPATA33Q96N06 139 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 ZKSCAN3Q9BRR0 538 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 IFIH1Q9BYX4 1025 aaKnown RBP14.25□□□□□ -0.13
PRPF8-208ENST00000573716 IGFLR1Q9H665 355 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 TCP11L1Q9NUJ3 509 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 ATG2AQ2TAZ0 1938 aa14.25□□□□□ -0.13
PRPF8-208ENST00000573716 C17orf102A2RUQ5 167 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 EIF3JO75822 258 aaKnown RBP14.24□□□□□ -0.13
PRPF8-208ENST00000573716 CFBP00751 764 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 FGAP02671 866 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 NR3C2P08235 984 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 FGRP09769 529 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 GPATCH4Q5T3I0 446 aaKnown RBP14.24□□□□□ -0.13
PRPF8-208ENST00000573716 SERINC5Q86VE9 423 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 MCF2L2Q86YR7 1114 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 ATP6V0A1Q93050 837 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 EMID1Q96A84 441 aaPredicted RBP14.24□□□□□ -0.13
PRPF8-208ENST00000573716 POP1Q99575 1024 aaKnown RBP14.24□□□□□ -0.13
PRPF8-208ENST00000573716 VAT1LQ9HCJ6 419 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 WDFY4Q6ZS81 3184 aa14.24□□□□□ -0.13
PRPF8-208ENST00000573716 GGPS1O95749 300 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 SNHG28P0DPA3 235 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 MX1P20591 662 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 ALX1Q15699 326 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 MFSD6Q6ZSS7 791 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 RNF135Q8IUD6 432 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 FIBCD1Q8N539 461 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 TOP1MTQ969P6 601 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 TTC14Q96N46 770 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 PXMP2Q9NR77 195 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 RCAN3Q9UKA8 241 aa14.23□□□□□ -0.13
PRPF8-208ENST00000573716 MRPL11Q9Y3B7 192 aaKnown RBP14.23□□□□□ -0.13
PRPF8-208ENST00000573716 STXBP3O00186 592 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 NCK2O43639 380 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 PPFIA4O75335 1185 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 LTBRP36941 435 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 DLX2Q07687 328 aaPredicted RBP14.22□□□□□ -0.13
PRPF8-208ENST00000573716 HYAL1Q12794 435 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 MKRN4PQ13434 485 aaPredicted RBP14.22□□□□□ -0.13
PRPF8-208ENST00000573716 SMAD2Q15796 467 aaKnown RBP14.22□□□□□ -0.13
PRPF8-208ENST00000573716 QRICH1Q2TAL8 776 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 HSDL1Q3SXM5 330 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 ADGRF4Q8IZF3 695 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 IL17RAQ96F46 866 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 ZFP91Q96JP5 570 aaPredicted RBP14.22□□□□□ -0.13
PRPF8-208ENST00000573716 OSBPL7Q9BZF2 842 aa14.22□□□□□ -0.13
PRPF8-208ENST00000573716 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 GRM6O15303 877 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 TREHO43280 583 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 MBTPS2O43462 519 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 SMIM10L2AP0DMW4 78 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 SMIM10L2BP0DMW5 78 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 HSPD1P10809 573 aaKnown RBP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 GTF2F1P35269 517 aaKnown RBP eCLIP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 COL19A1Q14993 1142 aa14.21□□□□□ -0.13
PRPF8-208ENST00000573716 HERC4Q5GLZ8 1057 aaPredicted RBP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 CELF3Q5SZQ8 465 aaKnown RBP14.21□□□□□ -0.13
PRPF8-208ENST00000573716 MYSM1Q5VVJ2 828 aa14.21□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 24.8 ms