RNA–Protein interactions for RNA: ENST00000573667.1

ABR-222, Transcript of ABR, RhoGEF and GTPase activating protein, human

TSL 4

Gene ABR, Length 560 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
ABR-222	ENST00000573667	CELF3	Q5SZQ8	465 aa	Known RBP	13.72	□□□□□ -0.21
ABR-222	ENST00000573667	MYSM1	Q5VVJ2	828 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	PCNX4	Q63HM2	1172 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	PSRC1	Q6PGN9	363 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-222	ENST00000573667	NLRX1	Q86UT6	975 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	DEFB123	Q8N688	67 aa		13.72	□□□□□ -0.21
ABR-222	ENST00000573667	ZNF713	Q8N859	430 aa	Predicted RBP	13.72	□□□□□ -0.21
ABR-222	ENST00000573667	SZT2	Q5T011	3432 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	NOP56	O00567	594 aa	Known RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	PPFIA4	O75335	1185 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	CYP2C9	P11712	490 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	ICAM3	P32942	547 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	CCL23	P55773	120 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	UBE2S	Q16763	222 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	WWC2	Q6AWC2	1192 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	PPP1R18	Q6NYC8	613 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	RPUSD2	Q8IZ73	545 aa	Known RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	C7orf31	Q8N865	590 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	INPP4A	Q96PE3	977 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	BUD13	Q9BRD0	619 aa	Known RBP eCLIP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	ALG1	Q9BT22	464 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667	NOC4L	Q9BVI4	516 aa	Known RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	MTIF3	Q9H2K0	278 aa	Known RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	IL23A	Q9NPF7	189 aa		13.71	□□□□□ -0.21
ABR-222	ENST00000573667		V9GY48	417 aa	Predicted RBP	13.71	□□□□□ -0.21
ABR-222	ENST00000573667	UMODL1	Q5DID0	1318 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	ZNF286B	P0CG31	522 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	ACR	P10323	421 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	CDC27	P30260	824 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	PSEN2	P49810	448 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	ADCY7	P51828	1080 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	SMAD3	P84022	425 aa	Known RBP	13.7	□□□□□ -0.22
ABR-222	ENST00000573667	AKAP17A	Q02040	695 aa	Known RBP	13.7	□□□□□ -0.22
ABR-222	ENST00000573667	SP2	Q02086	613 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	BFSP2	Q13515	415 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	MFSD10	Q14728	455 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	PTGIS	Q16647	500 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	HSDL1	Q3SXM5	330 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	ZNF697	Q5TEC3	545 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	RUFY3	Q7L099	469 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	TEX2	Q8IWB9	1127 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	FBXL16	Q8N461	479 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	CCDC155	Q8N6L0	562 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	RETREG2	Q8NC44	543 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	GIMAP8	Q8ND71	665 aa	Predicted RBP	13.7	□□□□□ -0.22
ABR-222	ENST00000573667	PPP1R13L	Q8WUF5	828 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	CDHR1	Q96JP9	859 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	GLT8D2	Q9H1C3	349 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	PCDHA6	Q9UN73	950 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	PCDHA8	Q9Y5H6	950 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	CYP46A1	Q9Y6A2	500 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	LAMA3	Q16787	3333 aa		13.7	□□□□□ -0.22
ABR-222	ENST00000573667	HSFX4	A0A1B0GTS1	333 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-222	ENST00000573667	HSFX3	A0A1B0GWH4	333 aa	Predicted RBP	13.69	□□□□□ -0.22
ABR-222	ENST00000573667	SMCO2	A6NFE2	343 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	SPATA31C2	B4DYI2	1134 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	F2	P00734	622 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	FGB	P02675	491 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	ADD1	P35611	737 aa	Known RBP	13.69	□□□□□ -0.22
ABR-222	ENST00000573667	KIAA0753	Q2KHM9	967 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	TMEM240	Q5SV17	173 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	METTL7B	Q6UX53	244 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	ZNF365	Q70YC5	407 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667		Q7L0L9	218 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	CYFIP1	Q7L576	1253 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	SESTD1	Q86VW0	696 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	KAT2B	Q92831	832 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	GPRASP2	Q96D09	838 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	USP26	Q9BXU7	913 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	AGXT2	Q9BYV1	514 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	RIC8A	Q9NPQ8	531 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	BARHL2	Q9NY43	387 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	NID2	Q14112	1375 aa		13.69	□□□□□ -0.22
ABR-222	ENST00000573667	STXBP3	O00186	592 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	PITPNM1	O00562	1244 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	EIF5B	O60841	1220 aa	Known RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	FOS	P01100	380 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	PFKM	P08237	780 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	FUT2	Q10981	343 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	MTMR1	Q13613	665 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	PFKFB3	Q16875	520 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	FAM109B	Q6ICB4	259 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	GDF6	Q6KF10	455 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	CCDC12	Q8WUD4	166 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	SCLY	Q96I15	445 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	SENP7	Q9BQF6	1050 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	WNT8A	Q9H1J5	351 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	ZSWIM6	Q9HCJ5	1215 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	FAM217B	Q9NTX9	383 aa	Predicted RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	HDAC6	Q9UBN7	1215 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	GTF2IRD1	Q9UHL9	959 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	MYH9	P35579	1960 aa	Known RBP	13.68	□□□□□ -0.22
ABR-222	ENST00000573667	WDR81	Q562E7	1941 aa		13.68	□□□□□ -0.22
ABR-222	ENST00000573667	HAS3	O00219	553 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	MAFG	O15525	162 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	HOXD8	P13378	290 aa	Predicted RBP	13.67	□□□□□ -0.22
ABR-222	ENST00000573667	SCG2	P13521	617 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	RFC2	P35250	354 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	SP4	Q02446	784 aa		13.67	□□□□□ -0.22
ABR-222	ENST00000573667	SEMA3F	Q13275	785 aa		13.67	□□□□□ -0.22

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