RNA–Protein interactions for RNA: ENST00000573360.5

TVP23A-207, Transcript of trans-golgi network vesicle protein 23 homolog A, humanhuman

TSL 2

Gene TVP23A, Length 3,677 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TVP23A-207ENST00000573360 EDIL3O43854 480 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 ARP10275 920 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 ERCC6LQ2NKX8 1250 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 LRCH2Q5VUJ6 765 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 LPAR1Q92633 364 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 MTMR8Q96EF0 704 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 COL20A1Q9P218 1284 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 GLTPD2A6NH11 291 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 RPN1P04843 607 aaKnown RBP15.56■□□□□ 0.08
TVP23A-207ENST00000573360 FCER1AP12319 257 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 MYL5Q02045 173 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 SV2BQ7L1I2 683 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 CCDC150Q8NCX0 1101 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 CCDC43Q96MW1 224 aaKnown RBP15.56■□□□□ 0.08
TVP23A-207ENST00000573360 ZNF577Q9BSK1 485 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 TAF1DQ9H5J8 278 aaPredicted RBP15.56■□□□□ 0.08
TVP23A-207ENST00000573360 EXOC1Q9NV70 894 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 VWA5AO00534 786 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 COG2Q14746 738 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 NELFCDQ8IXH7 590 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 SLC10A4Q96EP9 437 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 WDR11Q9BZH6 1224 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 OGFRQ9NZT2 677 aa15.56■□□□□ 0.08
TVP23A-207ENST00000573360 CD44P16070 742 aaKnown RBP15.55■□□□□ 0.08
TVP23A-207ENST00000573360 ECM1Q16610 540 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 MYH4Q9Y623 1939 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 NAALADL2Q58DX5 795 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 PPP1R18Q6NYC8 613 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 ARMCX5Q6P1M9 558 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 SMCR8Q8TEV9 937 aaPredicted RBP15.55■□□□□ 0.08
TVP23A-207ENST00000573360 NMRK2Q9NPI5 230 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 MSH4O15457 936 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 ICAM1P05362 532 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 DMTNQ08495 405 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 RANBP17Q9H2T7 1088 aaKnown RBP15.55■□□□□ 0.08
TVP23A-207ENST00000573360 SNCAIPQ9Y6H5 919 aa15.55■□□□□ 0.08
TVP23A-207ENST00000573360 FOSP01100 380 aaPredicted RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 PSMC6P62333 389 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 KMT5BQ4FZB7 885 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 BTNL9Q6UXG8 535 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 BANK1Q8NDB2 785 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 DDX55Q8NHQ9 600 aaKnown RBP eCLIP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 LARP4BQ92615 738 aaKnown RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 CCDC47Q96A33 483 aaKnown RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 OPTNQ96CV9 577 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 GRIN3BO60391 1043 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 CYP2C8P10632 490 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 PPP1R13BQ96KQ4 1090 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 MMTAG2Q9BU76 263 aaKnown RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 GLT8D2Q9H1C3 349 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 PRDM4Q9UKN5 801 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 POLR2AP24928 1970 aaKnown RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 MDM2Q00987 491 aaPredicted RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 AP3B2Q13367 1082 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 ZNF397Q8NF99 534 aaPredicted RBP15.54■□□□□ 0.08
TVP23A-207ENST00000573360 TRIM47Q96LD4 638 aa15.54■□□□□ 0.08
TVP23A-207ENST00000573360 ERICH4A6NGS2 130 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 GRB10Q13322 594 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 TMEM132BQ14DG7 1078 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 PDXDC2PQ6P474 469 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 UBXN4Q92575 508 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 ERO1AQ96HE7 468 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 VPS16Q9H269 839 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 CBFA2T2O43439 604 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 CLK2P49760 499 aaKnown RBP15.53■□□□□ 0.08
TVP23A-207ENST00000573360 E4F1Q66K89 784 aaPredicted RBP15.53■□□□□ 0.08
TVP23A-207ENST00000573360 GPBP1Q86WP2 473 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 MTMR9Q96QG7 549 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 WDR18Q9BV38 432 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 BHMT2Q9H2M3 363 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 SLC38A10Q9HBR0 1119 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 TUBE1Q9UJT0 475 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 ZNF536O15090 1300 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 KIF2AO00139 706 aaPredicted RBP15.53■□□□□ 0.08
TVP23A-207ENST00000573360 LAD1O00515 517 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 GTPBP6O43824 516 aaPredicted RBP15.53■□□□□ 0.08
TVP23A-207ENST00000573360 MED24O75448 989 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 DPYDQ12882 1025 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 SEPT14Q6ZU15 432 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 NELFBQ8WX92 580 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 R3HDMLQ9H3Y0 253 aa15.53■□□□□ 0.08
TVP23A-207ENST00000573360 TMEM150BA6NC51 233 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 IQCA1LA6NCM1 817 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 EML1O00423 815 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 CELF2O95319 508 aaKnown RBP15.52■□□□□ 0.08
TVP23A-207ENST00000573360 E2F4Q16254 413 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 CEP55Q53EZ4 464 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 HERC4Q5GLZ8 1057 aaPredicted RBP15.52■□□□□ 0.08
TVP23A-207ENST00000573360 GLIS3Q8NEA6 775 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 PCMTD1Q96MG8 357 aaPredicted RBP15.52■□□□□ 0.08
TVP23A-207ENST00000573360 SYNRGQ9UMZ2 1314 aa15.52■□□□□ 0.08
TVP23A-207ENST00000573360 PGK2P07205 417 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 PRCPP42785 496 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 CNTN2Q02246 1040 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 ARHGAP29Q52LW3 1261 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 FBXO38Q6PIJ6 1188 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 ARMC9Q7Z3E5 817 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 ANKRD13AQ8IZ07 590 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 DDX12PQ92771 950 aa15.52■□□□□ 0.07
TVP23A-207ENST00000573360 BCAS3Q9H6U6 928 aa15.52■□□□□ 0.07
Retrieved 100 of 20,778 RNA–protein pairs in 32.7 ms