RNA–Protein interactions for RNA: ENST00000572967.1

NDE1-206, Transcript of nudE neurodevelopment protein 1, humanhuman

TSL 3

Gene NDE1, Length 484 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NDE1-206ENST00000572967 SCRN1Q12765 414 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 CUL4AQ13619 759 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 LY6KQ17RY6 165 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 BRDTQ58F21 947 aaPredicted RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 TMEM240Q5SV17 173 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 PSRC1Q6PGN9 363 aaPredicted RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 FAM177A1Q8N128 213 aaPredicted RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 FAM184AQ8NB25 1140 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 RGS22Q8NE09 1264 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 MTMR8Q96EF0 704 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 RRP36Q96EU6 259 aaKnown RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 NOC4LQ9BVI4 516 aaKnown RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 RNF26Q9BY78 433 aaPredicted RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 TTYH1Q9H313 450 aaPredicted RBP13.6□□□□□ -0.23
NDE1-206ENST00000572967 PXMP2Q9NR77 195 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 SMC3Q9UQE7 1217 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 PCDHA1Q9Y5I3 950 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 PTPRSQ13332 1948 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 STK36Q9NRP7 1315 aa13.6□□□□□ -0.23
NDE1-206ENST00000572967 hCG_1984214I3L0E3 225 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 SORBS3O60504 671 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 MMP3P08254 477 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 CYP2C9P11712 490 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 PDCP20941 246 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 DNAJB2P25686 324 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 HSD17B4P51659 736 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 SSRP1Q08945 709 aaKnown RBP13.59□□□□□ -0.23
NDE1-206ENST00000572967 STXBP2Q15833 593 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 RAB11FIP4Q86YS3 637 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 ZNF713Q8N859 430 aaPredicted RBP13.59□□□□□ -0.23
NDE1-206ENST00000572967 NECAB1Q8N987 351 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 SLC17A8Q8NDX2 589 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 IL31RAQ8NI17 732 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 AFG1LQ8WV93 481 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 SCLYQ96I15 445 aa13.59□□□□□ -0.23
NDE1-206ENST00000572967 LARP6Q9BRS8 491 aaKnown RBP13.59□□□□□ -0.23
NDE1-206ENST00000572967 NCOA5Q9HCD5 579 aaKnown RBP13.59□□□□□ -0.23
NDE1-206ENST00000572967 DEXIO95424 95 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 LARGE1O95461 756 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 GH1P01241 217 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 ZNF286BP0CG31 522 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 MYCLP12524 364 aaPredicted RBP13.58□□□□□ -0.24
NDE1-206ENST00000572967 ARHGAP1Q07960 439 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 NBPF20Q3BBV1 942 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 CCDC62Q6P9F0 684 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 ZNF365Q70YC5 407 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 C16orf59Q7L2K0 433 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 CCDC12Q8WUD4 166 aaPredicted RBP13.58□□□□□ -0.24
NDE1-206ENST00000572967 MYLIPQ8WY64 445 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 ZFP91Q96JP5 570 aaPredicted RBP13.58□□□□□ -0.24
NDE1-206ENST00000572967 CDX2Q99626 313 aaPredicted RBP13.58□□□□□ -0.24
NDE1-206ENST00000572967 RIOX1Q9H6W3 641 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 IL23AQ9NPF7 189 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 MRVI1Q9Y6F6 885 aa13.58□□□□□ -0.24
NDE1-206ENST00000572967 TRIP12Q14669 1992 aaPredicted RBP13.58□□□□□ -0.24
NDE1-206ENST00000572967 COL4A4P53420 1690 aaPredicted RBP13.57□□□□□ -0.24
NDE1-206ENST00000572967 A6NJR5 290 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 GRXCR1A8MXD5 290 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 NR3C2P08235 984 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 CDC27P30260 824 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 ADD1P35611 737 aaKnown RBP13.57□□□□□ -0.24
NDE1-206ENST00000572967 TRIM29Q14134 588 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 PGM5Q15124 567 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 OTOP2Q7RTS6 562 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 FCHSD1Q86WN1 690 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 NSUN7Q8NE18 718 aaKnown RBP13.57□□□□□ -0.24
NDE1-206ENST00000572967 CCDC148Q8NFR7 591 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 IPO9Q96P70 1041 aaKnown RBP13.57□□□□□ -0.24
NDE1-206ENST00000572967 IWS1Q96ST2 819 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 PDCD2LQ9BRP1 358 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 SLC26A6Q9BXS9 759 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 MAF1Q9H063 256 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 ORC3Q9UBD5 711 aaPredicted RBP13.57□□□□□ -0.24
NDE1-206ENST00000572967 CNTNAP5Q8WYK1 1306 aa13.57□□□□□ -0.24
NDE1-206ENST00000572967 HSFX4A0A1B0GTS1 333 aaPredicted RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 HSFX3A0A1B0GWH4 333 aaPredicted RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 GCOM1H8Y6P7 765 aaPredicted RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 PRPF3O43395 683 aaKnown RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 PLEKHA8P1O95397 391 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 POLR2MP0CAP2 368 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 PBX2P40425 430 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 GHRHRQ02643 423 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 TEX2Q8IWB9 1127 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 SEZ6LQ9BYH1 1024 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 SEMA6BQ9H3T3 888 aa13.56□□□□□ -0.24
NDE1-206ENST00000572967 FAM217BQ9NTX9 383 aaPredicted RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 CXXC1Q9P0U4 656 aaPredicted RBP13.56□□□□□ -0.24
NDE1-206ENST00000572967 TMEM265A0A087WTH1 108 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 PNMA6FA0A0J9YX94 578 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 ZBBXA8MT70 800 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 FOSL2P15408 326 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 UBA1P22314 1058 aaKnown RBP13.55□□□□□ -0.24
NDE1-206ENST00000572967 CCND2P30279 289 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 PPP1R18Q6NYC8 613 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 NFRKBQ6P4R8 1299 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 DEFB128Q7Z7B8 93 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 CMTR1Q8N1G2 835 aaKnown RBP13.55□□□□□ -0.24
NDE1-206ENST00000572967 SRBD1Q8N5C6 995 aaKnown RBP13.55□□□□□ -0.24
NDE1-206ENST00000572967 SMARCC2Q8TAQ2 1214 aa13.55□□□□□ -0.24
NDE1-206ENST00000572967 HERVK_113Q902F9 699 aa13.55□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms