RNA–Protein interactions for RNA: ENST00000572778.5

CHMP6-204, Transcript of charged multivesicular body protein 6, humanhuman

TSL 2

Gene CHMP6, Length 737 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHMP6-204ENST00000572778 GRIN2DO15399 1336 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 TRIM43BA6NCK2 446 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 SPATA31C2B4DYI2 1134 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 TLR3O15455 904 aaKnown RBP23.67■■□□□ 1.38
CHMP6-204ENST00000572778 FIBPO43427 364 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 UBA1P22314 1058 aaKnown RBP23.67■■□□□ 1.38
CHMP6-204ENST00000572778 ICAM3P32942 547 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 SCRN1Q12765 414 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 CELF3Q5SZQ8 465 aaKnown RBP23.67■■□□□ 1.38
CHMP6-204ENST00000572778 MYSM1Q5VVJ2 828 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 SLC43A3Q8NBI5 491 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 EMID1Q96A84 441 aaPredicted RBP23.67■■□□□ 1.38
CHMP6-204ENST00000572778 TRIM43Q96BQ3 446 aaPredicted RBP23.67■■□□□ 1.38
CHMP6-204ENST00000572778 MLXIPQ9HAP2 919 aa23.67■■□□□ 1.38
CHMP6-204ENST00000572778 ESYT2A0FGR8 921 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 PFKFB2O60825 505 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 CHMP4BP1P59074 171 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 DGKDQ16760 1214 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 HABP4Q5JVS0 413 aaKnown RBP23.66■■□□□ 1.38
CHMP6-204ENST00000572778 JAKMIP3Q5VZ66 844 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 SPATA33Q96N06 139 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 ANO3Q9BYT9 981 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 ZMYND12Q9H0C1 365 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 VPS54Q9P1Q0 977 aa23.66■■□□□ 1.38
CHMP6-204ENST00000572778 DEXIO95424 95 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 GNA11P29992 359 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 CLK2P49760 499 aaKnown RBP23.65■■□□□ 1.38
CHMP6-204ENST00000572778 SEMA3FQ13275 785 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 AP3B2Q13367 1082 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 FAM126BQ8IXS8 530 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 CCDC148Q8NFR7 591 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 PPTC7Q8NI37 304 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 SEZ6LQ9BYH1 1024 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 PRO3102Q9H379 93 aa23.65■■□□□ 1.38
CHMP6-204ENST00000572778 CDKL5O76039 1030 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 RAG1P15918 1043 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 NEDD9Q14511 834 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 NBPF20Q3BBV1 942 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 FAM47CQ5HY64 1035 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 PPP1R13LQ8WUF5 828 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 BADQ92934 168 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 GPRASP2Q96D09 838 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 C22orf23Q9BZE7 217 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 UBE2OQ9C0C9 1292 aaKnown RBP23.64■■□□□ 1.37
CHMP6-204ENST00000572778 BCAS3Q9H6U6 928 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 UBIAD1Q9Y5Z9 338 aa23.64■■□□□ 1.37
CHMP6-204ENST00000572778 KIAA0355O15063 1070 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 ADAMTS3O15072 1205 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 CEP290O15078 2479 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 ITGB5P18084 799 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 BMP8BP34820 402 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 NLRP5P59047 1200 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 HSDL1Q3SXM5 330 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 CYFIP1Q7L576 1253 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 REXO1Q8N1G1 1221 aaKnown RBP23.63■■□□□ 1.37
CHMP6-204ENST00000572778 CDHR1Q96JP9 859 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 TRPV6Q9H1D0 765 aa23.63■■□□□ 1.37
CHMP6-204ENST00000572778 DNAH12Q6ZR08 3092 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 NOP56O00567 594 aaKnown RBP23.62■■□□□ 1.37
CHMP6-204ENST00000572778 ITGB8P26012 769 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 MTMR1Q13613 665 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 ME3Q16798 604 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 NECAB1Q8N987 351 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 BICD2Q8TD16 824 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 JADE2Q9NQC1 790 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 SH3GLB2Q9NR46 395 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 PKD2L1Q9P0L9 805 aa23.62■■□□□ 1.37
CHMP6-204ENST00000572778 KIAA1217Q5T5P2 1943 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 B4GALT4O60513 344 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 DTNBO60941 627 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 PPFIA4O75335 1185 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 CD4P01730 458 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 ZNF76P36508 570 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 SREBF1P36956 1147 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 MCTP2Q6DN12 878 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 METTL7BQ6UX53 244 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 RASGRP4Q8TDF6 673 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 SENP7Q9BQF6 1050 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 MXRA8Q9BRK3 442 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 TBX21Q9UL17 535 aa23.61■■□□□ 1.37
CHMP6-204ENST00000572778 ATP9AO75110 1047 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 LARGE1O95461 756 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 ZNF286BP0CG31 522 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 ARHGAP4P98171 946 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 SP4Q02446 784 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 GIMAP8Q8ND71 665 aaPredicted RBP23.6■■□□□ 1.37
CHMP6-204ENST00000572778 KAT2BQ92831 832 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 AIFM3Q96NN9 605 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 PPP1R12CQ9BZL4 782 aa23.6■■□□□ 1.37
CHMP6-204ENST00000572778 UPF2Q9HAU5 1272 aaKnown RBP23.6■■□□□ 1.37
CHMP6-204ENST00000572778 MAFGO15525 162 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 TIMP1P01033 207 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 PSEN2P49810 448 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 CEP55Q53EZ4 464 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 NFRKBQ6P4R8 1299 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 CYP2W1Q8TAV3 490 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 ALG1Q9BT22 464 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 KATNAL1Q9BW62 490 aa23.59■■□□□ 1.37
CHMP6-204ENST00000572778 TRMT13Q9NUP7 481 aaKnown RBP23.59■■□□□ 1.37
CHMP6-204ENST00000572778 CTDNEP1O95476 244 aa23.58■■□□□ 1.37
Retrieved 100 of 20,778 RNA–protein pairs in 23.3 ms