RNA–Protein interactions for RNA: ENST00000572438.1

CHRNE-202, Transcript of cholinergic receptor nicotinic epsilon subunit, humanhuman

TSL 5

Gene CHRNE, Length 1,847 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNE-202ENST00000572438 PPIL2Q13356 520 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 DHX8Q14562 1220 aaKnown RBP23.03■■□□□ 1.28
CHRNE-202ENST00000572438 PCNX4Q63HM2 1172 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 MED15Q96RN5 788 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 FANCLQ9NW38 375 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 KCNH4Q9UQ05 1017 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 CLEC11AQ9Y240 323 aa23.03■■□□□ 1.28
CHRNE-202ENST00000572438 RBBP6Q7Z6E9 1792 aaKnown RBP23.02■■□□□ 1.28
CHRNE-202ENST00000572438 HOXA7P31268 230 aaPredicted RBP23.02■■□□□ 1.28
CHRNE-202ENST00000572438 ASIC1P78348 528 aa23.02■■□□□ 1.28
CHRNE-202ENST00000572438 GADL1Q6ZQY3 521 aa23.02■■□□□ 1.28
CHRNE-202ENST00000572438 TRMT44Q8IYL2 757 aaKnown RBP23.02■■□□□ 1.28
CHRNE-202ENST00000572438 CCDC47Q96A33 483 aaKnown RBP23.02■■□□□ 1.28
CHRNE-202ENST00000572438 TAAR1Q96RJ0 339 aa23.02■■□□□ 1.28
CHRNE-202ENST00000572438 MED24O75448 989 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 PSMD10O75832 226 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 BCRP11274 1271 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 LRCH2Q5VUJ6 765 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 NIPA1Q7RTP0 329 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 IL31RAQ8NI17 732 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 KIAA1024Q9UPX6 916 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 NFE2L3Q9Y4A8 694 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 PTPRFP10586 1907 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 POTEB3A0JP26 581 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 MYMKA6NI61 221 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 ARP10275 920 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 ITGB5P18084 799 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 RPA1P27694 616 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 BAATQ14032 418 aaPredicted RBP23.01■■□□□ 1.27
CHRNE-202ENST00000572438 LDLRAD1Q5T700 205 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 KLHL10Q6JEL2 608 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 CNNM4Q6P4Q7 775 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 POTEBQ6S5H4 581 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 OTOP1Q7RTM1 612 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 SPC24Q8NBT2 197 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 ZFP91Q96JP5 570 aaPredicted RBP23.01■■□□□ 1.27
CHRNE-202ENST00000572438 ZNF577Q9BSK1 485 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 MAF1Q9H063 256 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 GDAQ9Y2T3 454 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 SYNRGQ9UMZ2 1314 aa23.01■■□□□ 1.27
CHRNE-202ENST00000572438 LOC285556D6RIA3 1793 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 GOLGA6L6A8MZA4 724 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 POTEIP0CG38 1075 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 POTEJP0CG39 1038 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 ATP1A3P13637 1013 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 CATSPER3Q86XQ3 398 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 GIMAP8Q8ND71 665 aaPredicted RBP23■■□□□ 1.27
CHRNE-202ENST00000572438 RMDN3Q96TC7 470 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 GTPBP4Q9BZE4 634 aaKnown RBP23■■□□□ 1.27
CHRNE-202ENST00000572438 ACAD9Q9H845 621 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 UBIAD1Q9Y5Z9 338 aa23■■□□□ 1.27
CHRNE-202ENST00000572438 COL11A1P12107 1806 aaPredicted RBP23■■□□□ 1.27
CHRNE-202ENST00000572438 GAS7O60861 476 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 EIF2AK2P19525 551 aaKnown RBP22.99■■□□□ 1.27
CHRNE-202ENST00000572438 PPP2R5CQ13362 524 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 PLS1Q14651 629 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 PGM5Q15124 567 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 SPATA1Q5VX52 437 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 LBX2Q6XYB7 198 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 DRC7Q8IY82 874 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 MB21D1Q8N884 522 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 OPTNQ96CV9 577 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 PXMP2Q9NR77 195 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 EXOC1Q9NV70 894 aa22.99■■□□□ 1.27
CHRNE-202ENST00000572438 PVALEFA0A1B0GWK0 134 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 SPATA31C1P0DKV0 1188 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 MRPS9P82933 396 aaKnown RBP22.98■■□□□ 1.27
CHRNE-202ENST00000572438 FANCCQ00597 558 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 MAP1SQ66K74 1059 aaPredicted RBP22.98■■□□□ 1.27
CHRNE-202ENST00000572438 RIT2Q99578 217 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 PDCD2LQ9BRP1 358 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 POLR3CQ9BUI4 534 aaPredicted RBP22.98■■□□□ 1.27
CHRNE-202ENST00000572438 WDR11Q9BZH6 1224 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 IFNKQ9P0W0 207 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 CTNND2Q9UQB3 1225 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 E9PMD0 336 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 IPO5O00410 1097 aaKnown RBP22.98■■□□□ 1.27
CHRNE-202ENST00000572438 EML1O00423 815 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 ZNF18P17022 549 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 PRCPP42785 496 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 PDE4DQ08499 809 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 ARHGEF16Q5VV41 709 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 ADSSL1Q8N142 457 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 JADE2Q9NQC1 790 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 RWDD2AQ9UIY3 292 aa22.98■■□□□ 1.27
CHRNE-202ENST00000572438 POTEFA5A3E0 1075 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 PLA2G4BP0C869 781 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 STX17P56962 302 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 IRX3P78415 501 aaPredicted RBP22.97■■□□□ 1.27
CHRNE-202ENST00000572438 PAK1Q13153 545 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 XRRA1Q6P2D8 792 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 POTEGQ6S5H5 508 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 POTEEQ6S8J3 1075 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 UNC13DQ70J99 1090 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 ZSCAN30Q86W11 494 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 EIF2AK1Q9BQI3 630 aaKnown RBP22.97■■□□□ 1.27
CHRNE-202ENST00000572438 TEKT3Q9BXF9 490 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 XPO4Q9C0E2 1151 aaKnown RBP22.97■■□□□ 1.27
CHRNE-202ENST00000572438 KCNH7Q9NS40 1196 aa22.97■■□□□ 1.27
CHRNE-202ENST00000572438 AGTPBP1Q9UPW5 1226 aa22.97■■□□□ 1.27
Retrieved 100 of 20,778 RNA–protein pairs in 28.7 ms