RNA–Protein interactions for RNA: ENST00000572355.5

HCFC1R1-203, Transcript of host cell factor C1 regulator 1, humanhuman

TSL 3 BASIC

Gene HCFC1R1, Length 610 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HCFC1R1-203ENST00000572355 ERVK-21P61565 698 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 MBTPS1Q14703 1052 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 TRIM71Q2Q1W2 868 aaKnown RBP18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 TMEM31Q5JXX7 168 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 TRAF7Q6Q0C0 670 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 UBE2ZQ9H832 354 aaPredicted RBP18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 DIAPH3Q9NSV4 1193 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 LMCD1Q9NZU5 365 aa18.71■□□□□ 0.59
HCFC1R1-203ENST00000572355 FAM86C2PA6NEL3 165 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 OPLAHO14841 1288 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 LGR5O75473 907 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 NT5C2P49902 561 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 B4GALNT3Q6L9W6 998 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 LIN28BQ6ZN17 250 aaKnown RBP eCLIP18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 STAG2Q8N3U4 1231 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 ANKS1AQ92625 1134 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 SPATA33Q96N06 139 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 AMNQ9BXJ7 453 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 ZSWIM5Q9P217 1185 aa18.7■□□□□ 0.58
HCFC1R1-203ENST00000572355 GGPS1O95749 300 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 HOXA13P31271 388 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 HSD17B4P51659 736 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 IRX6P78412 446 aaPredicted RBP18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 HIC1Q14526 733 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 IMMTQ16891 758 aaKnown RBP18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 HSDL1Q3SXM5 330 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 MYOCDQ8IZQ8 938 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 FBXO22Q8NEZ5 403 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 PDCD2LQ9BRP1 358 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 C17orf80Q9BSJ5 609 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 UBAC1Q9BSL1 405 aa18.69■□□□□ 0.58
HCFC1R1-203ENST00000572355 PPP1R11O60927 126 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 RGS20O76081 388 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 AMHP03971 560 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 UBA1P22314 1058 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 THPOP40225 353 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 PGM5Q15124 567 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 CELF3Q5SZQ8 465 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 IFIT1BQ5T764 474 aaKnown RBP18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 MYSM1Q5VVJ2 828 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 DBF4BQ8NFT6 615 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 IL31RAQ8NI17 732 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 ZFP91Q96JP5 570 aaPredicted RBP18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 CD320Q9NPF0 282 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 EMSYQ7Z589 1322 aa18.68■□□□□ 0.58
HCFC1R1-203ENST00000572355 RSPH10B2B2RC85 870 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 KLRF2D3W0D1 207 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 RSPH10BP0C881 870 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 HOXD8P13378 290 aaPredicted RBP18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 KCNA5P22460 613 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 HOMER1Q86YM7 354 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 DSCC1Q9BVC3 393 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 KRT23Q9C075 422 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 C11orf16Q9NQ32 467 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 INSL6Q9Y581 213 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 PCDHA1Q9Y5I3 950 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 NLRC5Q86WI3 1866 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 DOCK5Q9H7D0 1870 aa18.67■□□□□ 0.58
HCFC1R1-203ENST00000572355 C17orf102A2RUQ5 167 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 ZBTB5O15062 677 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 PPFIA4O75335 1185 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 KCNV1Q6PIU1 500 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 SERINC5Q86VE9 423 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 PLEKHM2Q8IWE5 1019 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 EXOC6Q8TAG9 804 aa18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 GPKOWQ92917 476 aaPredicted RBP eCLIP18.66■□□□□ 0.58
HCFC1R1-203ENST00000572355 CTSHP09668 335 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 CCND2P30279 289 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 SP2Q02086 613 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 GHRHRQ02643 423 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 STOX1Q6ZVD7 989 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 FCHSD1Q86WN1 690 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 ATP6V0A1Q93050 837 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 C16orf70Q9BSU1 422 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 CNNM2Q9H8M5 875 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 MLXIPQ9HAP2 919 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 MAD2L2Q9UI95 211 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 BRWD1Q9NSI6 2320 aa18.65■□□□□ 0.58
HCFC1R1-203ENST00000572355 PPAN-P2RY11A0A0B4J1V8 794 aaPredicted RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 HIP1O00291 1037 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 GPR37L1O60883 481 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 SMIM10L2AP0DMW4 78 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 SMIM10L2BP0DMW5 78 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 IL9P15248 144 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 HOXD11P31277 338 aaPredicted RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 SSTR3P32745 418 aaPredicted RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 HTRA4P83105 476 aaPredicted RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 MKRN4PQ13434 485 aaPredicted RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 LEXMQ3ZCV2 418 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 VSIG10LQ86VR7 867 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 CHD1LQ86WJ1 897 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 SMC5Q8IY18 1101 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 MTMR8Q96EF0 704 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 YME1L1Q96TA2 773 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 MAP3K20Q9NYL2 800 aaKnown RBP18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 CTNNA3Q9UI47 895 aa18.64■□□□□ 0.57
HCFC1R1-203ENST00000572355 PI4K2BG5E9Z4 385 aa18.63■□□□□ 0.57
HCFC1R1-203ENST00000572355 H3BRB1 525 aa18.63■□□□□ 0.57
HCFC1R1-203ENST00000572355 LGALS2P05162 132 aa18.63■□□□□ 0.57
HCFC1R1-203ENST00000572355 SEC23AQ15436 765 aa18.63■□□□□ 0.57
Retrieved 100 of 20,778 RNA–protein pairs in 23.7 ms