RNA–Protein interactions for RNA: ENST00000569919.1

UBFD1-209, Transcript of ubiquitin family domain containing 1, humanhuman

TSL 5

Gene UBFD1, Length 739 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
UBFD1-209ENST00000569919 HTR3BO95264 441 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 IMPDH2P12268 514 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 IREB2P48200 963 aaKnown RBP7.63□□□□□ -1.19
UBFD1-209ENST00000569919 GIPRP48546 466 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 RIPK4P57078 832 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 ID3Q02535 119 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 KIF22Q14807 665 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 GRIK4Q16099 956 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 SHISA2Q6UWI4 295 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 ANKRD13AQ8IZ07 590 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 ZBED3Q96IU2 234 aaPredicted RBP7.63□□□□□ -1.19
UBFD1-209ENST00000569919 PTPN18Q99952 460 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 HTATIP2Q9BUP3 242 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 HYPKQ9NX55 129 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 ADAMTS8Q9UP79 889 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 HIF3AQ9Y2N7 669 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 NR2E3Q9Y5X4 410 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 TACC3Q9Y6A5 838 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 PTCH2Q9Y6C5 1203 aa7.63□□□□□ -1.19
UBFD1-209ENST00000569919 A0A1W2PPC1 479 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 TMPRSS2O15393 492 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 MYO1BO43795 1136 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 USP2O75604 605 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 SASH1O94885 1247 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 PCCAP05165 728 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 PRMT2P55345 433 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 ERVK-24P63145 666 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 RING1Q06587 406 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 LMOD3Q0VAK6 560 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 DLGAP5Q15398 846 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 PPM1JQ5JR12 505 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 ZC3HAV1Q7Z2W4 902 aaKnown RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CKAP2LQ8IYA6 745 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CLMNQ96JQ2 1002 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CDC5LQ99459 802 aaKnown RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 MXD3Q9BW11 206 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CYP4F12Q9HCS2 524 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 BSDC1Q9NW68 430 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CRIM1Q9NZV1 1036 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 CHPF2Q9P2E5 772 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 MINPP1Q9UNW1 487 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 FZD1Q9UP38 647 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 LEMD3Q9Y2U8 911 aa7.62□□□□□ -1.19
UBFD1-209ENST00000569919 COL1A1P02452 1464 aaPredicted RBP7.62□□□□□ -1.19
UBFD1-209ENST00000569919 MED23Q9ULK4 1368 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 DLG5Q8TDM6 1919 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 WTIPA6NIX2 430 aaPredicted RBP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 CHL1O00533 1208 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 HOXB7P09629 217 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 DRD2P14416 443 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PLCG1P19174 1290 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 CCT4P50991 539 aaKnown RBP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PDE4BQ07343 736 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 ANKS3Q6ZW76 656 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 AGGF1Q8N302 714 aaeCLIP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 TMEM130Q8N3G9 435 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 FAM169BQ8N8A8 192 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 C12orf50Q8NA57 414 aaPredicted RBP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 RBBP8NLQ8NC74 664 aaPredicted RBP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 CCDC191Q8NCU4 936 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 SMG8Q8ND04 991 aaKnown RBP7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PRO3102Q9H379 93 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 ANTXR1Q9H6X2 564 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 SUGCTQ9HAC7 445 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PICK1Q9NRD5 415 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 DISC1Q9NRI5 854 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 REV1Q9UBZ9 1251 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PRKAG3Q9UGI9 489 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 AP4E1Q9UPM8 1137 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 PSME4Q14997 1843 aa7.61□□□□□ -1.19
UBFD1-209ENST00000569919 F8W735 103 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-209ENST00000569919 SMAD7O15105 426 aaKnown RBP7.6□□□□□ -1.19
UBFD1-209ENST00000569919 SPATA31C1P0DKV0 1188 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 ADH5P11766 374 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 CAPN2P17655 700 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 HOXD10P28358 340 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 GRK4P32298 578 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 GTF2A2P52657 109 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 ETF1P62495 437 aaKnown RBP7.6□□□□□ -1.19
UBFD1-209ENST00000569919 CAP1Q01518 475 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 SOX4Q06945 474 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-209ENST00000569919 LSRQ86X29 649 aaPredicted RBP7.6□□□□□ -1.19
UBFD1-209ENST00000569919 OR6P1Q8NGX9 317 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 FANCD2OSQ96PS1 177 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 WNT10AQ9GZT5 417 aa7.6□□□□□ -1.19
UBFD1-209ENST00000569919 ZNF804BA4D1E1 1349 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 FANCGO15287 622 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 KLF4O43474 513 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 TLR2O60603 784 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 ALX3O95076 343 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 PGRP06401 933 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 LRRFIP1Q32MZ4 808 aaKnown RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 CCDC144BQ3MJ40 725 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 NBPF12Q5TAG4 269 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 ZBTB37Q5TC79 503 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 FDX2Q6P4F2 183 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 SH3TC2Q8TF17 1288 aa7.59□□□□□ -1.19
UBFD1-209ENST00000569919 HNRNPLLQ8WVV9 542 aaKnown RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 LENG1Q96BZ8 264 aaPredicted RBP7.59□□□□□ -1.19
UBFD1-209ENST00000569919 OPTNQ96CV9 577 aa7.59□□□□□ -1.19
Retrieved 100 of 20,778 RNA–protein pairs in 21.6 ms