RNA–Protein interactions for RNA: ENST00000569891.5

CYLD-216, Transcript of CYLD lysine 63 deubiquitinase, humanhuman

TSL 1 (best)

Gene CYLD, Length 4,665 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CYLD-216ENST00000569891 PES1O00541 588 aaKnown RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 N4BP3O15049 544 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CCNE1P24864 410 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 JAK3P52333 1124 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 IRX3P78415 501 aaPredicted RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 MDM2Q00987 491 aaPredicted RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 ZYXQ15942 572 aaKnown RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 LRCH2Q5VUJ6 765 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 TYW1BQ6NUM6 668 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 PDXDC2PQ6P474 469 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CCDC186Q7Z3E2 898 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 FILIP1Q7Z7B0 1213 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CHST13Q8NET6 341 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 NELFBQ8WX92 580 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 MBOAT7Q96N66 472 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CPVLQ9H3G5 476 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 ZNF112Q9UJU3 913 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 COL4A3BPQ9Y5P4 624 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 H0YCG3 227 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 BCRP11274 1271 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 ALAS1P13196 640 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 E2F4Q16254 413 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CEP55Q53EZ4 464 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 RETREG2Q8NC44 543 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 GIMAP8Q8ND71 665 aaPredicted RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 PDGFDQ9GZP0 370 aaPredicted RBP6.72□□□□□ -1.33
CYLD-216ENST00000569891 TMEM260Q9NX78 707 aa6.72□□□□□ -1.33
CYLD-216ENST00000569891 CALUO43852 315 aaPredicted RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 TERF1P54274 439 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 HYIQ5T013 277 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 NCAPH2Q6IBW4 605 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 CCDC84Q86UT8 332 aaPredicted RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 CLEC10AQ8IUN9 316 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 ANKRD13AQ8IZ07 590 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 RPAP3Q9H6T3 665 aaPredicted RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 CTNND2Q9UQB3 1225 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 CXCL11O14625 94 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 FAM13AO94988 1023 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 RPA1P27694 616 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 PTGER2P43116 358 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 MTIF2P46199 727 aaKnown RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 PRELPP51888 382 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 KRT76Q01546 638 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 EPHA7Q15375 998 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 GPR162Q16538 588 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 EARS2Q5JPH6 523 aaKnown RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 ARHGEF16Q5VV41 709 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 SPECC1LQ69YQ0 1117 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 USP17L6PQ6QN14 398 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 SAMD7Q7Z3H4 446 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 USP37Q86T82 979 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 EXOC8Q8IYI6 725 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 MYOCDQ8IZQ8 938 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 GUF1Q8N442 669 aaKnown RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 PCMTD1Q96MG8 357 aaPredicted RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 ZNF577Q9BSK1 485 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 TEX13BQ9BXU2 312 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 NUCKS1Q9H1E3 243 aaKnown RBP6.71□□□□□ -1.33
CYLD-216ENST00000569891 TMEM60Q9H2L4 133 aa6.71□□□□□ -1.33
CYLD-216ENST00000569891 AKAP9Q99996 3911 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 PFASO15067 1338 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 TDP2O95551 362 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 DNM2P50570 870 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 CCNA1P78396 465 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 SPP2Q13103 211 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 RNF207Q6ZRF8 634 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 OTUD6AQ7L8S5 288 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 ACER1Q8TDN7 264 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 NUP88Q99567 741 aaPredicted RBP6.71□□□□□ -1.34
CYLD-216ENST00000569891 TRIM9Q9C026 710 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 ACAD9Q9H845 621 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 ZHX2Q9Y6X8 837 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 UBE4BO95155 1302 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 FAM26FQ5R3K3 315 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 ISM2Q6H9L7 571 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 MIER3Q7Z3K6 550 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 CREBRFQ8IUR6 639 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 DHX37Q8IY37 1157 aaKnown RBP6.71□□□□□ -1.34
CYLD-216ENST00000569891 CSGALNACT2Q8N6G5 542 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 NSUN6Q8TEA1 469 aaKnown RBP6.71□□□□□ -1.34
CYLD-216ENST00000569891 P2RX5Q93086 422 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 PRIMPOLQ96LW4 560 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 XPO4Q9C0E2 1151 aaKnown RBP6.71□□□□□ -1.34
CYLD-216ENST00000569891 KCNMB3Q9NPA1 279 aa6.71□□□□□ -1.34
CYLD-216ENST00000569891 IGF2BP2Q9Y6M1 599 aaKnown RBP eCLIP6.71□□□□□ -1.34
CYLD-216ENST00000569891 LOC102724159A0A0B4J2E5 919 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 SLC25A27O95847 323 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 ECE1P42892 770 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 MTMR2Q13614 643 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PWP2Q15269 919 aaKnown RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 KMT5BQ4FZB7 885 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 KCNV1Q6PIU1 500 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 HS2ST1Q7LGA3 356 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 GPBP1Q86WP2 473 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PROCA1Q8NCQ7 364 aaPredicted RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 SLC38A10Q9HBR0 1119 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PANK4Q9NVE7 773 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 CGNQ9P2M7 1197 aaKnown RBP6.7□□□□□ -1.34
CYLD-216ENST00000569891 DAAM1Q9Y4D1 1078 aa6.7□□□□□ -1.34
CYLD-216ENST00000569891 PHLPP2Q6ZVD8 1323 aa6.7□□□□□ -1.34
Retrieved 100 of 20,778 RNA–protein pairs in 28.6 ms