RNA–Protein interactions for RNA: ENST00000569702.1

SHCBP1-207, Transcript of SHC binding and spindle associated 1, humanhuman

TSL 3

Gene SHCBP1, Length 465 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SHCBP1-207ENST00000569702 FIBPO43427 364 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 CD4P01730 458 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 MYL3P08590 195 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 HOXD8P13378 290 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 UBA1P22314 1058 aaKnown RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 MAGEA10P43363 369 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 NEK4P51957 841 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 PSMC6P62333 389 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 SSRP1Q08945 709 aaKnown RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 AP3B2Q13367 1082 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 FAM126BQ8IXS8 530 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 DHX37Q8IY37 1157 aaKnown RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 PPTC7Q8NI37 304 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 CCDC12Q8WUD4 166 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 TRIM43Q96BQ3 446 aaPredicted RBP12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 KIF2CQ99661 725 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 SENP7Q9BQF6 1050 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 PCDH10Q9P2E7 1040 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 PRKAG2Q9UGJ0 569 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 UBIAD1Q9Y5Z9 338 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 TRIOBPQ9H2D6 2365 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 SCN10AQ9Y5Y9 1956 aa12.69□□□□□ -0.38
SHCBP1-207ENST00000569702 ADAMTS3O15072 1205 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 DEXIO95424 95 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 GGPS1O95749 300 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 ITGB5P18084 799 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 SREBF1P36956 1147 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 RBM25P49756 843 aaKnown RBP12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 DGKDQ16760 1214 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 HSDL1Q3SXM5 330 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 CPLX2Q6PUV4 134 aaKnown RBP12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 NLRX1Q86UT6 975 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 TRIM22Q8IYM9 498 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 CRYGNQ8WXF5 182 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 GPRASP2Q96D09 838 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 ANO3Q9BYT9 981 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 SLKQ9H2G2 1235 aaPredicted RBP12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 BCAS3Q9H6U6 928 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 EHMT1Q9H9B1 1298 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 C6orf50Q9HD87 102 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 PRDM5Q9NQX1 630 aaPredicted RBP12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 SH3GLB2Q9NR46 395 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 TMEM260Q9NX78 707 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 TBX21Q9UL17 535 aa12.68□□□□□ -0.38
SHCBP1-207ENST00000569702 LAMA2P24043 3122 aaKnown RBP12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 MYH7BA7E2Y1 1941 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 A0A1W2PPC1 479 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 MAFGO15525 162 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 PPFIA4O75335 1185 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 ITGB8P26012 769 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 GNA11P29992 359 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 NEDD9Q14511 834 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 ME3Q16798 604 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 HABP4Q5JVS0 413 aaKnown RBP12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 MCTP2Q6DN12 878 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 METTL7BQ6UX53 244 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 FAM177A1Q8N128 213 aaPredicted RBP12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 CCDC148Q8NFR7 591 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 KAT2BQ92831 832 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 CDHR1Q96JP9 859 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 PGBD1Q96JS3 809 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 SPATA33Q96N06 139 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 C22orf23Q9BZE7 217 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 JADE2Q9NQC1 790 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 TMEM39AQ9NV64 488 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 VPS54Q9P1Q0 977 aa12.67□□□□□ -0.38
SHCBP1-207ENST00000569702 TLR3O15455 904 aaKnown RBP12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 B4GALT4O60513 344 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 ATP9AO75110 1047 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 CDKL5O76039 1030 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 LARGE1O95461 756 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 CTDNEP1O95476 244 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 KCNA2P16389 499 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 MDM2Q00987 491 aaPredicted RBP12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 PTPN11Q06124 597 aaPredicted RBP12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 MTMR1Q13613 665 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 NBPF20Q3BBV1 942 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 JAKMIP3Q5VZ66 844 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 NFRKBQ6P4R8 1299 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 CYFIP1Q7L576 1253 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 REXO1Q8N1G1 1221 aaKnown RBP12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 BICD2Q8TD16 824 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 GTF3C6Q969F1 213 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 LBHD1Q9BQE6 289 aaPredicted RBP12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 MXRA8Q9BRK3 442 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 MLXIPQ9HAP2 919 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 LTBP2Q14767 1821 aa12.66□□□□□ -0.38
SHCBP1-207ENST00000569702 STK36Q9NRP7 1315 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 HAS3O00219 553 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 MEIS1O00470 390 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 SORBS3O60504 671 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 F2P00734 622 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 CYP3A4P08684 503 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 ARHGAP4P98171 946 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 NPY5RQ15761 445 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 CEP55Q53EZ4 464 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 SESTD1Q86VW0 696 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 NECAB1Q8N987 351 aa12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 GIMAP8Q8ND71 665 aaPredicted RBP12.65□□□□□ -0.38
SHCBP1-207ENST00000569702 CYP2W1Q8TAV3 490 aa12.65□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 19.1 ms