RNA–Protein interactions for RNA: ENST00000569569.5

HERPUD1-218, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 1,125 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-218ENST00000569569 GDF15Q99988 308 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 MTG1Q9BT17 334 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 PRO3102Q9H379 93 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 PRDM5Q9NQX1 630 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 PDLIM7Q9NR12 457 aa15.84■□□□□ 0.13
HERPUD1-218ENST00000569569 ESYT2A0FGR8 921 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 TLR3O15455 904 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 MMP3P08254 477 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 BMP8BP34820 402 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 AK2P54819 239 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 SP2Q02086 613 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 CELF3Q5SZQ8 465 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 MYSM1Q5VVJ2 828 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 NLRX1Q86UT6 975 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 LBHD1Q9BQE6 289 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 ZMYND12Q9H0C1 365 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 SLKQ9H2G2 1235 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 TMEM39AQ9NV64 488 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 TRIP12Q14669 1992 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
HERPUD1-218ENST00000569569 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 SPATA31C2B4DYI2 1134 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 FIBPO43427 364 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 PPFIA3O75145 1194 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 GGPS1O95749 300 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 GNA11P29992 359 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 NEK4P51957 841 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 PSMC6P62333 389 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 NEDD9Q14511 834 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 DGKDQ16760 1214 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 HABP4Q5JVS0 413 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 FAM126BQ8IXS8 530 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 TPCN1Q9ULQ1 816 aa15.82■□□□□ 0.12
HERPUD1-218ENST00000569569 KIAA0355O15063 1070 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 PFKFB2O60825 505 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 DEXIO95424 95 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 SCRN1Q12765 414 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 SEMA3FQ13275 785 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 CDHR1Q96JP9 859 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 SENP7Q9BQF6 1050 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 SH3GLB2Q9NR46 395 aa15.81■□□□□ 0.12
HERPUD1-218ENST00000569569 A0A1W2PPC1 479 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 MAFGO15525 162 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 CDKL5O76039 1030 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 CD4P01730 458 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 RAG1P15918 1043 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 NBPF20Q3BBV1 942 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 BICD2Q8TD16 824 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 SPATA33Q96N06 139 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 TMEM260Q9NX78 707 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 PCDH10Q9P2E7 1040 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
HERPUD1-218ENST00000569569 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 ITGB5P18084 799 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 NFRKBQ6P4R8 1299 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 METTL7BQ6UX53 244 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 CYFIP1Q7L576 1253 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 GIMAP8Q8ND71 665 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 BADQ92934 168 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 C22orf23Q9BZE7 217 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 VPS54Q9P1Q0 977 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
HERPUD1-218ENST00000569569 SORBS3O60504 671 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 B4GALT4O60513 344 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 TIMP1P01033 207 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 SUPT20HL2P0C7V6 817 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 HOXD8P13378 290 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 ITGB8P26012 769 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 SREBF1P36956 1147 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 NLRP5P59047 1200 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 PTPN11Q06124 597 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 MTMR1Q13613 665 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 ME3Q16798 604 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 FAM177A1Q8N128 213 aaPredicted RBP15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 REXO1Q8N1G1 1221 aaKnown RBP15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 KAT2BQ92831 832 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 MXRA8Q9BRK3 442 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 KATNAL1Q9BW62 490 aa15.78■□□□□ 0.12
HERPUD1-218ENST00000569569 BCAS3Q9H6U6 928 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 47.7 ms