RNA–Protein interactions for RNA: ENST00000569236.5

NSMCE1-214, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 2

Gene NSMCE1, Length 1,782 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-214ENST00000569236 AP3B2Q13367 1082 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 GNPTABQ3T906 1256 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 CCSAPQ6IQ19 270 aaPredicted RBP14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 CCDC62Q6P9F0 684 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 KCNV1Q6PIU1 500 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 OR6J1Q8NGC5 347 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 SH3GLB2Q9NR46 395 aa14.32□□□□□ -0.12
NSMCE1-214ENST00000569236 STK36Q9NRP7 1315 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 A0A1W2PQ45 241 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 A0A1W2PQY0 241 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 CTAGE5O15320 804 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 ZEB2O60315 1214 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 EVI5O60447 810 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 ASGR1P07306 291 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 GJB2P29033 226 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 CLK2P49760 499 aaKnown RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 CPT1AP50416 773 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 ATN1P54259 1190 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 LY6KQ17RY6 165 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 BRDTQ58F21 947 aaPredicted RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 REXO1Q8N1G1 1221 aaKnown RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 BICD2Q8TD16 824 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 COPS5Q92905 334 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 RTEL1Q9NZ71 1219 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 DDX41Q9UJV9 622 aaKnown RBP14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 ALPK3Q96L96 1907 aa14.31□□□□□ -0.12
NSMCE1-214ENST00000569236 CTDNEP1O95476 244 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 GH1P01241 217 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 PGBD1Q96JS3 809 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 GLT1D1Q96MS3 346 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 INPP4AQ96PE3 977 aaPredicted RBP14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 ANO3Q9BYT9 981 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 TMEM260Q9NX78 707 aa14.3□□□□□ -0.12
NSMCE1-214ENST00000569236 ZSCAN22P10073 491 aaPredicted RBP14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 TGFB3P10600 412 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 XBP1P17861 261 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 NLRP5P59047 1200 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 LRRC26Q2I0M4 334 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 JAKMIP3Q5VZ66 844 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 MCTP2Q6DN12 878 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 SLC39A5Q6ZMH5 540 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 NLRX1Q86UT6 975 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 WASF1Q92558 559 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 AIFM3Q96NN9 605 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 GZF1Q9H116 711 aaPredicted RBP14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 STARD7Q9NQZ5 370 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 ORC3Q9UBD5 711 aaPredicted RBP14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 FSD2A1L4K1 749 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 FAM177A1Q8N128 213 aaPredicted RBP14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 VTI1AQ96AJ9 217 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 NR2E3Q9Y5X4 410 aa14.29□□□□□ -0.12
NSMCE1-214ENST00000569236 MYH7BA7E2Y1 1941 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 ELP1O95163 1332 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 A6NJR5 290 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 FIBPO43427 364 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 DTNBO60941 627 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 PDCP20941 246 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 UBA1P22314 1058 aaKnown RBP14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 ICAM3P32942 547 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 ARHGAP1Q07960 439 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 FOXD4L5Q5VV16 416 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 CXCL17Q6UXB2 119 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 DHX37Q8IY37 1157 aaKnown RBP14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 C7orf61Q8IZ16 206 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 NSUN7Q8NE18 718 aaKnown RBP14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 FOXD4L4Q8WXT5 416 aaPredicted RBP14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 CDHR1Q96JP9 859 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 POLR3EQ9NVU0 708 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 PCDHA4Q9UN74 947 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 ATP6V1DQ9Y5K8 247 aa14.28□□□□□ -0.12
NSMCE1-214ENST00000569236 SPATA31C2B4DYI2 1134 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 CABYRO75952 493 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 GGPS1O95749 300 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 F13A1P00488 732 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 SREBF1P36956 1147 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 LAMC2Q13753 1193 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 SNX17Q15036 470 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 C1orf53Q5VUE5 145 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 GALNT17Q6IS24 598 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 AFG1LQ8WV93 481 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 EMID1Q96A84 441 aaPredicted RBP14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 GPRASP2Q96D09 838 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 MTMR6Q9Y217 621 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 ATP11BQ9Y2G3 1177 aa14.27□□□□□ -0.12
NSMCE1-214ENST00000569236 ADAMTS3O15072 1205 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 PRPF40AO75400 957 aaKnown RBP14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 MYL3P08590 195 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 FDPSP14324 419 aaKnown RBP14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 ITGB5P18084 799 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 RTP1P59025 263 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 ARHGAP4P98171 946 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 SP2Q02086 613 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 MTMR1Q13613 665 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 NEDD9Q14511 834 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 CELF3Q5SZQ8 465 aaKnown RBP14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 MYSM1Q5VVJ2 828 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 TMEM87AQ8NBN3 555 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 RASGRP4Q8TDF6 673 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 ALG1Q9BT22 464 aa14.27□□□□□ -0.13
NSMCE1-214ENST00000569236 MLXIPQ9HAP2 919 aa14.27□□□□□ -0.13
Retrieved 100 of 20,778 RNA–protein pairs in 11.8 ms