RNA–Protein interactions for RNA: ENST00000569122.1

SMG1-216, Transcript of SMG1, nonsense mediated mRNA decay associated PI3K related kinase, humanhuman

TSL 5

Gene SMG1, Length 562 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMG1-216ENST00000569122 TCTN1Q2MV58 587 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 NAALADL2Q58DX5 795 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 TRAF7Q6Q0C0 670 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 SEPT14Q6ZU15 432 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 SERINC5Q86VE9 423 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 MCF2L2Q86YR7 1114 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 CHMP4CQ96CF2 233 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 EPB41L4AQ9HCS5 686 aaPredicted RBP10.19□□□□□ -0.78
SMG1-216ENST00000569122 ECHDC1Q9NTX5 307 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 MTMR7Q9Y216 660 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 SCN10AQ9Y5Y9 1956 aa10.19□□□□□ -0.78
SMG1-216ENST00000569122 CFAP54Q96N23 3096 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 MCM3APO60318 1980 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 TOP1P11387 765 aaKnown RBP10.18□□□□□ -0.78
SMG1-216ENST00000569122 RLBP1P12271 317 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 SLC16A2P36021 539 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 NOVP48745 357 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 COASYQ13057 564 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 ADAM15Q13444 863 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 MBTPS1Q14703 1052 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 PHF7Q9BWX1 381 aaPredicted RBP10.18□□□□□ -0.78
SMG1-216ENST00000569122 LRRCC1Q9C099 1032 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 IGFLR1Q9H665 355 aa10.18□□□□□ -0.78
SMG1-216ENST00000569122 ZFHX2Q9C0A1 2572 aaPredicted RBP10.18□□□□□ -0.78
SMG1-216ENST00000569122 CACNA1AO00555 2505 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 ZDBF2Q9HCK1 2354 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 PTPRZ1P23471 2315 aaPredicted RBP10.17□□□□□ -0.78
SMG1-216ENST00000569122 ZNF318Q5VUA4 2279 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 C17orf102A2RUQ5 167 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 RANBP6O60518 1105 aaKnown RBP10.17□□□□□ -0.78
SMG1-216ENST00000569122 MMP1P03956 469 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 ID4P47928 161 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 DLX2Q07687 328 aaPredicted RBP10.17□□□□□ -0.78
SMG1-216ENST00000569122 MCTP2Q6DN12 878 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 TTBK2Q6IQ55 1244 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 EFHBQ8N7U6 833 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 SMRP1Q8NCR6 262 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 CLP1Q92989 425 aaKnown RBP10.17□□□□□ -0.78
SMG1-216ENST00000569122 ATP6V0A1Q93050 837 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 P2RX5Q93086 422 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 MSLNLQ96KJ4 702 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 RMDN3Q96TC7 470 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 FSD1Q9BTV5 496 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 IL17RBQ9NRM6 502 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 FAM86C1Q9NVL1 165 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 DDX41Q9UJV9 622 aaKnown RBP10.17□□□□□ -0.78
SMG1-216ENST00000569122 TRPC6Q9Y210 931 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 MRVI1Q9Y6F6 885 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 MYH8P13535 1937 aa10.17□□□□□ -0.78
SMG1-216ENST00000569122 COL4A4P53420 1690 aaPredicted RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 GREB1LQ9C091 1923 aaPredicted RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 GRM6O15303 877 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 GALR2O43603 387 aaPredicted RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 TBX10O75333 385 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 TGFB3P10600 412 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 HOXD8P13378 290 aaPredicted RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 ATF7P17544 494 aaPredicted RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 ICAM3P32942 547 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 GPATCH4Q5T3I0 446 aaKnown RBP10.16□□□□□ -0.78
SMG1-216ENST00000569122 ARHGEF16Q5VV41 709 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 TTC14Q96N46 770 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 GPCPD1Q9NPB8 672 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 TCP11L1Q9NUJ3 509 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 DDX19BQ9UMR2 479 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 SCN5AQ14524 2016 aa10.16□□□□□ -0.78
SMG1-216ENST00000569122 ABCB11O95342 1321 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 H0Y858 1186 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 KDM4AO75164 1064 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 ZNF286BP0CG31 522 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 SRGAP2BP0DMP2 458 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 NBL1P41271 181 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 RRP1P56182 461 aaKnown RBP10.15□□□□□ -0.78
SMG1-216ENST00000569122 ZNF200P98182 395 aaPredicted RBP10.15□□□□□ -0.78
SMG1-216ENST00000569122 BTG3Q14201 252 aaPredicted RBP10.15□□□□□ -0.78
SMG1-216ENST00000569122 ZBTB33Q86T24 672 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 RIPOR3Q96MK2 946 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 SPATA33Q96N06 139 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 TLR9Q9NR96 1032 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 PLAGL2Q9UPG8 496 aa10.15□□□□□ -0.78
SMG1-216ENST00000569122 DDX52Q9Y2R4 599 aaKnown RBP eCLIP10.15□□□□□ -0.78
SMG1-216ENST00000569122 MRPL11Q9Y3B7 192 aaKnown RBP10.15□□□□□ -0.78
SMG1-216ENST00000569122 COL4A6Q14031 1691 aa10.15□□□□□ -0.79
SMG1-216ENST00000569122 TET1Q8NFU7 2136 aa10.15□□□□□ -0.79
SMG1-216ENST00000569122 TANC1Q9C0D5 1861 aa10.15□□□□□ -0.79
SMG1-216ENST00000569122 FRMPD2Q68DX3 1309 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 ADGRA3Q8IWK6 1321 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 BAZ2AQ9UIF9 1905 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 LOC101059915A0A1B0GWI6 518 aaPredicted RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 PRR23AA6NEV1 266 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 H3BRB1 525 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 M0R2C6 588 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 ORC4O43929 436 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 NMT2O60551 498 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 NR3C2P08235 984 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 HSPD1P10809 573 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 PDHBP11177 359 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 KCNA4P22459 653 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 VCPP55072 806 aaKnown RBP10.14□□□□□ -0.79
SMG1-216ENST00000569122 ZNF543Q08ER8 600 aa10.14□□□□□ -0.79
SMG1-216ENST00000569122 PTPN21Q16825 1174 aa10.14□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 16.5 ms