RNA–Protein interactions for RNA: ENST00000567817.5

CAPN3-217, Transcript of calpain 3, humanhuman

TSL 5

Gene CAPN3, Length 711 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-217ENST00000567817 PDZD8Q8NEN9 1154 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 TCTN2Q96GX1 697 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 SEC16BQ96JE7 1060 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 SLC12A5Q9H2X9 1139 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 ADAMTS10Q9H324 1103 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 ACBD3Q9H3P7 528 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 CHMP4BQ9H444 224 aaKnown RBP6.62□□□□□ -1.35
CAPN3-217ENST00000567817 STRIP2Q9ULQ0 834 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 INPP5FQ9Y2H2 1132 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 SLC12A7Q9Y666 1083 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 BTAF1O14981 1849 aa6.62□□□□□ -1.35
CAPN3-217ENST00000567817 PLEKHG2Q9H7P9 1386 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 PLIN1O60240 522 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 ERCC5P28715 1186 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 GIPRP48546 466 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 NASPP49321 788 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 MTHFSP49914 203 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 HK2P52789 917 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 PCBP3P57721 371 aaKnown RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 CALD1Q05682 793 aaKnown RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 DUSP4Q13115 394 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 BBS9Q3SYG4 887 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 FYB2Q5VWT5 728 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 UNC5AQ6ZN44 842 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 RUFY4Q6ZNE9 571 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 CCDC144CPQ8IYA2 1237 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 C16orf71Q8IYS4 520 aaPredicted RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 POU5F2Q8N7G0 328 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 C19orf47Q8N9M1 422 aaKnown RBP6.61□□□□□ -1.35
CAPN3-217ENST00000567817 LINC00116Q8NCU8 138 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 CHST7Q9NS84 486 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 FAM53CQ9NYF3 392 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF281Q9Y2X9 895 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 PIK3C2AO00443 1686 aa6.61□□□□□ -1.35
CAPN3-217ENST00000567817 A0A1W2PP64 1363 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 COL18A1P39060 1754 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 FITM1A5D6W6 292 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 C9IYK1 514 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 ZYXQ15942 572 aaKnown RBP6.6□□□□□ -1.35
CAPN3-217ENST00000567817 TMEM67Q5HYA8 995 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 PPFIBP1Q86W92 1011 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 C7orf61Q8IZ16 206 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 LILRA2Q8N149 483 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 OXR1Q8N573 874 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 USHBP1Q8N6Y0 703 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 ABHD4Q8TB40 342 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 MYLIPQ8WY64 445 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 GFOD1Q9NXC2 390 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 PODXL2Q9NZ53 605 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 FBXL21Q9UKT6 434 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 TCFL5Q9UL49 500 aa6.6□□□□□ -1.35
CAPN3-217ENST00000567817 SSU72P8A0A1W2PR75 194 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 ZNF503-AS2A6NEH8 195 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 IQCJ-SCHIP1C9J366 451 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 SHOXO15266 292 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 EIF5BO60841 1220 aaKnown RBP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 U2AF1L5P0DN76 240 aaPredicted RBP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 ENDOUP21128 410 aaKnown RBP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 RARSP54136 660 aaKnown RBP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 U2AF1Q01081 240 aaKnown RBP eCLIP6.59□□□□□ -1.35
CAPN3-217ENST00000567817 CHRNEQ04844 493 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 NR0B2Q15466 257 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 ANKRD39Q53RE8 183 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 C20orf194Q5TEA3 1177 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 ANKS4BQ8N8V4 417 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 SHDQ96IW2 340 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 KRTAP9-2Q9BYQ4 174 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 FOXP3Q9BZS1 431 aa6.59□□□□□ -1.35
CAPN3-217ENST00000567817 IPO8O15397 1037 aaKnown RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 SYPP08247 313 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 IL2RBP14784 551 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 ERVFC1P60507 584 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 TDRD10Q5VZ19 366 aaKnown RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 ZKSCAN2Q63HK3 967 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 ARHGEF25Q86VW2 580 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 SPPL2CQ8IUH8 684 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 CPLX3Q8WVH0 158 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 CDK19Q9BWU1 502 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 RWDD1Q9H446 243 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 PHAXQ9H814 394 aaKnown RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 UPF2Q9HAU5 1272 aaKnown RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 SP110Q9HB58 689 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 GOLGA2P5Q9HBQ8 144 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 ZNF214Q9UL59 606 aaPredicted RBP6.58□□□□□ -1.36
CAPN3-217ENST00000567817 PXDNLA1KZ92 1463 aa6.58□□□□□ -1.36
CAPN3-217ENST00000567817 TUBGCP6Q96RT7 1819 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 IGSF1Q8N6C5 1336 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 KIF16BQ96L93 1317 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 TMEM82A0PJX8 343 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 DIAPH1O60610 1272 aaKnown RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 HSPA1AP0DMV8 641 aaKnown RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 HSPA1BP0DMV9 641 aaKnown RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 ATF4P18848 351 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 RPL10P27635 214 aaKnown RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 BMP8BP34820 402 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 RBM25P49756 843 aaKnown RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 LMOD3Q0VAK6 560 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 AXDND1Q5T1B0 1012 aaPredicted RBP6.57□□□□□ -1.36
CAPN3-217ENST00000567817 DCAF15Q66K64 600 aa6.57□□□□□ -1.36
CAPN3-217ENST00000567817 SMC1BQ8NDV3 1235 aa6.57□□□□□ -1.36
Retrieved 100 of 20,778 RNA–protein pairs in 6.9 ms