RNA–Protein interactions for RNA: ENST00000567234.1

LINC00543-201, long intergenic non-protein coding RNA 543, humanhuman

BASIC

Gene LINC00543, Length 1,845 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00543-201ENST00000567234 KCNJ12Q14500 433 aa25.94■■□□□ 1.74
LINC00543-201ENST00000567234 PRR16Q569H4 304 aa25.94■■□□□ 1.74
LINC00543-201ENST00000567234 KIAA1683Q9H0B3 1180 aa25.94■■□□□ 1.74
LINC00543-201ENST00000567234 ZNF215Q9UL58 517 aaPredicted RBP25.94■■□□□ 1.74
LINC00543-201ENST00000567234 GCOM1H8Y6P7 765 aaPredicted RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 WDR46O15213 610 aaKnown RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 TEX33O43247 280 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 CCP110O43303 1012 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 POLR2MP0CAP2 368 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 HIRAP54198 1017 aaPredicted RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 HAUS3Q68CZ6 603 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 FCHSD1Q86WN1 690 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 P2RX5Q93086 422 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 ZNF341Q9BYN7 854 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 GLIS2Q9BZE0 524 aaPredicted RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 EHMT1Q9H9B1 1298 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 FRMD4AQ9P2Q2 1039 aaPredicted RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 HACL1Q9UJ83 578 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 COPB1P53618 953 aaKnown RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 STK4Q13043 487 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 ZYXQ15942 572 aaKnown RBP25.93■■□□□ 1.74
LINC00543-201ENST00000567234 TC2NQ8N9U0 490 aa25.93■■□□□ 1.74
LINC00543-201ENST00000567234 HOXA13P31271 388 aaPredicted RBP25.92■■□□□ 1.74
LINC00543-201ENST00000567234 SPIRE1Q08AE8 756 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 ECM1Q16610 540 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 E4F1Q66K89 784 aaPredicted RBP25.92■■□□□ 1.74
LINC00543-201ENST00000567234 CCDC174Q6PII3 467 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 KCNK18Q7Z418 384 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 IRF2BP1Q8IU81 584 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 ERMNQ8TAM6 284 aa25.92■■□□□ 1.74
LINC00543-201ENST00000567234 FAM86B1E9PN63 330 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 STX10O60499 249 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 FAM86B2P0C5J1 330 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 CYP2C19P33261 490 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 KCTD17Q8N5Z5 321 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 GJA10Q969M2 543 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 HOOK2Q96ED9 719 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 TRIM47Q96LD4 638 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 DOCK1Q14185 1865 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 TRIM49BA6NDI0 452 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 N4BP3O15049 544 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 ARHGAP6O43182 974 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 TPM1P09493 284 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 PMS1P54277 932 aaKnown RBP25.91■■□□□ 1.74
LINC00543-201ENST00000567234 EHHADHQ08426 723 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 FOXR2Q6PJQ5 311 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 TMEM139Q8IV31 216 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 IPO4Q8TEX9 1081 aaKnown RBP25.91■■□□□ 1.74
LINC00543-201ENST00000567234 DDX12PQ92771 950 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 PANX2Q96RD6 677 aa25.91■■□□□ 1.74
LINC00543-201ENST00000567234 BMP2KQ9NSY1 1161 aaPredicted RBP25.91■■□□□ 1.74
LINC00543-201ENST00000567234 POLR2AP24928 1970 aaKnown RBP25.9■■□□□ 1.74
LINC00543-201ENST00000567234 USP27XA6NNY8 438 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 COBLO75128 1261 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 CFBP00751 764 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 DCAF15Q66K64 600 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 FBXO38Q6PIJ6 1188 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 PPFIBP1Q86W92 1011 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 LDHDQ86WU2 507 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 FAM114A1Q8IWE2 563 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 PRPF38AQ8NAV1 312 aaKnown RBP25.9■■□□□ 1.74
LINC00543-201ENST00000567234 KIAA0895Q8NCT3 520 aa25.9■■□□□ 1.74
LINC00543-201ENST00000567234 DUSP9Q99956 384 aaKnown RBP25.9■■□□□ 1.74
LINC00543-201ENST00000567234 SRRTQ9BXP5 876 aaKnown RBP25.9■■□□□ 1.74
LINC00543-201ENST00000567234 UCHL5Q9Y5K5 329 aaKnown RBP eCLIP25.9■■□□□ 1.74
LINC00543-201ENST00000567234 AKR1B15C9JRZ8 316 aaPredicted RBP25.89■■□□□ 1.74
LINC00543-201ENST00000567234 FCER1AP12319 257 aa25.89■■□□□ 1.74
LINC00543-201ENST00000567234 TAL1P17542 331 aaPredicted RBP25.89■■□□□ 1.74
LINC00543-201ENST00000567234 ZNF76P36508 570 aa25.89■■□□□ 1.74
LINC00543-201ENST00000567234 PTPN21Q16825 1174 aa25.89■■□□□ 1.74
LINC00543-201ENST00000567234 ANGEL2Q5VTE6 544 aaKnown RBP25.89■■□□□ 1.74
LINC00543-201ENST00000567234 CENPPQ6IPU0 288 aa25.89■■□□□ 1.74
LINC00543-201ENST00000567234 GUF1Q8N442 669 aaKnown RBP25.89■■□□□ 1.74
LINC00543-201ENST00000567234 MAGEC2Q9UBF1 373 aaPredicted RBP25.89■■□□□ 1.74
LINC00543-201ENST00000567234 MSH4O15457 936 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 ICAM1P05362 532 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 IRX5P78411 483 aaPredicted RBP25.88■■□□□ 1.73
LINC00543-201ENST00000567234 TRIM14Q14142 442 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 DNAJC19Q96DA6 116 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 BAG1Q99933 345 aaPredicted RBP25.88■■□□□ 1.73
LINC00543-201ENST00000567234 FBXO28Q9NVF7 368 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 ARGLU1Q9NWB6 273 aaPredicted RBP25.88■■□□□ 1.73
LINC00543-201ENST00000567234 KIAA1024Q9UPX6 916 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 RABGAP1Q9Y3P9 1069 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 IGLV3-22A0A075B6J6 115 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 RPA1P27694 616 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 INPP5BP32019 993 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 TEX35Q5T0J7 233 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 DYMQ7RTS9 669 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 APOBEC3FQ8IUX4 373 aaKnown RBP25.88■■□□□ 1.73
LINC00543-201ENST00000567234 CSGALNACT2Q8N6G5 542 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 SLF1Q9BQI6 1058 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 PNMA2Q9UL42 364 aa25.88■■□□□ 1.73
LINC00543-201ENST00000567234 CCDC84Q86UT8 332 aaPredicted RBP25.87■■□□□ 1.73
LINC00543-201ENST00000567234 CCDC51Q96ER9 411 aa25.87■■□□□ 1.73
LINC00543-201ENST00000567234 NAA15Q9BXJ9 866 aaKnown RBP25.87■■□□□ 1.73
LINC00543-201ENST00000567234 VPS16Q9H269 839 aa25.87■■□□□ 1.73
LINC00543-201ENST00000567234 TAB2Q9NYJ8 693 aa25.87■■□□□ 1.73
LINC00543-201ENST00000567234 GGA3Q9NZ52 723 aa25.87■■□□□ 1.73
LINC00543-201ENST00000567234 PLA2G4BP0C869 781 aa25.86■■□□□ 1.73
Retrieved 100 of 20,778 RNA–protein pairs in 14.7 ms