RNA–Protein interactions for RNA: ENST00000566550.1

HERPUD1-211, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 2

Gene HERPUD1, Length 511 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-211ENST00000566550 MAOBP27338 520 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 RENBPP51606 427 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SCAND1P57086 179 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 ERVK-21P61565 698 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 GUCY1A3Q02108 690 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 GTF2H3Q13889 308 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SIM2Q14190 667 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF267Q14586 743 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 POU4F3Q15319 338 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 NTRK3Q16288 839 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 PPM1JQ5JR12 505 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 ABHD17CQ6PCB6 329 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 CCDC174Q6PII3 467 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 MMS22LQ6ZRQ5 1243 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 ASXL2Q76L83 1435 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 CYFIP1Q7L576 1253 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 CATIPQ7Z7H3 387 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 CLASRPQ8N2M8 674 aaKnown RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 IGSF22Q8N9C0 903 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 C1orf131Q8NDD1 294 aaKnown RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SMC1BQ8NDV3 1235 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 C1orf162Q8NEQ5 155 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 BHLHE22Q8NFJ8 381 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 BAHD1Q8TBE0 780 aaPredicted RBP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 FBLIM1Q8WUP2 373 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 CHTF18Q8WVB6 975 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 FAM168AQ92567 244 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 FAXDC2Q96IV6 333 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 MYD88Q99836 296 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 MENTQ9BUN1 341 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 SLC13A1Q9BZW2 595 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 LRRC4CQ9HCJ2 640 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 KLHL11Q9NVR0 708 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 NOL12Q9UGY1 213 aaKnown RBP eCLIP4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 HDAC9Q9UKV0 1011 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 INVSQ9Y283 1065 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 COQ6Q9Y2Z9 468 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGB6Q9Y5F9 930 aa4.08□□□□□ -1.76
HERPUD1-211ENST00000566550 ABHD14A-ACY1A0A1B0GW23 586 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 FZD9O00144 591 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CBX4O00257 560 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 RGS13O14921 159 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TIMM44O43615 452 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CTNND1O60716 968 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 PQBP1O60828 265 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ULK1O75385 1050 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 SOD2P04179 222 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CYP11A1P05108 521 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 SRGAP2CP0DJJ0 459 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 SRGNP10124 158 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ITGA4P13612 1032 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 KPNA1P52294 538 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 AK2P54819 239 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF280AP59817 542 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 HTRA3P83110 453 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 KCTD2Q14681 263 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 LLGL1Q15334 1064 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TOMM20Q15388 145 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ZNF792Q3KQV3 632 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TMEM240Q5SV17 173 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 GTF2IRD2BQ6EKJ0 949 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 LILRA6Q6PI73 481 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 KCNT2Q6UVM3 1135 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 NFXL1Q6ZNB6 911 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CCDC149Q6ZUS6 474 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 MAMDC2Q7Z304 686 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 MAATS1Q7Z4T9 603 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 GTF2IRD2Q86UP8 949 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 MYLK4Q86YV6 388 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ZC3H7AQ8IWR0 971 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TRIM59Q8IWR1 403 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CMTR2Q8IYT2 770 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CRACR2BQ8N4Y2 399 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TMEM145Q8NBT3 493 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CLRN3Q8NCR9 226 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 PPHLN1Q8NEY8 458 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 XAGE3Q8WTP9 111 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 SMARCC1Q92922 1105 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TRIM63Q969Q1 353 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 MISP3Q96FF7 219 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 WDR89Q96FK6 387 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TMEM87BQ96K49 555 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 MRGPRX3Q96LB0 322 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 EIF2AK1Q9BQI3 630 aaKnown RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 USP26Q9BXU7 913 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TCF7L1Q9HCS4 588 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CABP5Q9NP86 173 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 JADE2Q9NQC1 790 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 CYP26B1Q9NR63 512 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 FAM53CQ9NYF3 392 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 H2AFY2Q9P0M6 372 aaPredicted RBP4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 WHRNQ9P202 907 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 FNIP2Q9P278 1114 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 TJP2Q9UDY2 1190 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 GTF2IRD1Q9UHL9 959 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 ADAM30Q9UKF2 790 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHGB3Q9Y5G1 929 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 PCDHA8Q9Y5H6 950 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 DGKBQ9Y6T7 804 aa4.07□□□□□ -1.76
HERPUD1-211ENST00000566550 PRRG2O14669 202 aa4.06□□□□□ -1.76
Retrieved 100 of 20,778 RNA–protein pairs in 65.4 ms