RNA–Protein interactions for RNA: ENST00000566385.2

LINC00562-201, long intergenic non-protein coding RNA 562, humanhuman

BASIC

Gene LINC00562, Length 2,470 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC00562-201ENST00000566385 SH3D19Q5HYK7 790 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 SV2BQ7L1I2 683 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 ZC3H15Q8WU90 426 aaKnown RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 FAM20AQ96MK3 541 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 C7orf25Q9BPX7 421 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 RNF146Q9NTX7 359 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 CTNND2Q9UQB3 1225 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 TRAF5O00463 557 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 CHMP2AO43633 222 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 RHOBTB3O94955 611 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 ZNF18P17022 549 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 EIF2AK2P19525 551 aaKnown RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 ERCC5P28715 1186 aaPredicted RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 IREB2P48200 963 aaKnown RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 PMS1P54277 932 aaKnown RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 MAP1SQ66K74 1059 aaPredicted RBP12.72□□□□□ -0.37
LINC00562-201ENST00000566385 ZSCAN30Q86W11 494 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 RGL1Q9NZL6 768 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 PKD2L1Q9P0L9 805 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 STK17AQ9UEE5 414 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 DACH1Q9UI36 760 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 RPTORQ8N122 1335 aa12.72□□□□□ -0.37
LINC00562-201ENST00000566385 TRIM49BA6NDI0 452 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 PSMD10O75832 226 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 GHRHRQ02643 423 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 BAATQ14032 418 aaPredicted RBP12.71□□□□□ -0.37
LINC00562-201ENST00000566385 PLS1Q14651 629 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 HYIQ5T013 277 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 OTOP1Q7RTM1 612 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 MCF2L2Q86YR7 1114 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 DDX12PQ92771 950 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 ZKSCAN5Q9Y2L8 839 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 SCN4AP35499 1836 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 SYNRGQ9UMZ2 1314 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 GRIN3BO60391 1043 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 PDE4DQ08499 809 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 RAD51AP2Q09MP3 1159 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 LRMPQ12912 555 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 KCNB1Q14721 858 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 RNF207Q6ZRF8 634 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 FILIP1Q7Z7B0 1213 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 ANKRD13AQ8IZ07 590 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 RBM46Q8TBY0 533 aaKnown RBP12.71□□□□□ -0.37
LINC00562-201ENST00000566385 EEF2KMTQ96G04 330 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 R3HDMLQ9H3Y0 253 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 MAGEF1Q9HAY2 307 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 INTS13Q9NVM9 706 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 RMND1Q9NWS8 449 aa12.71□□□□□ -0.37
LINC00562-201ENST00000566385 NPHP3-ACAD11A0A0J9YXS1 232 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 ZBTB39O15060 712 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 SERPINC1P01008 464 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 SSBP05455 408 aaKnown RBP eCLIP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 MYL1P05976 194 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 CACNB1Q02641 598 aaPredicted RBP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 LRCH2Q5VUJ6 765 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 GADL1Q6ZQY3 521 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 ARHGAP30Q7Z6I6 1101 aaPredicted RBP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 ADSSL1Q8N142 457 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 GIMAP8Q8ND71 665 aaPredicted RBP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 GLIS3Q8NEA6 775 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 RMDN3Q96TC7 470 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 MXRA8Q9BRK3 442 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 ZNF577Q9BSK1 485 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 KCNH7Q9NS40 1196 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 CLEC11AQ9Y240 323 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 RBBP6Q7Z6E9 1792 aaKnown RBP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 DDX39AO00148 427 aaKnown RBP12.7□□□□□ -0.38
LINC00562-201ENST00000566385 RPA1P27694 616 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 UBASH3AP57075 661 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 TPM4P67936 248 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 PGM5Q15124 567 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 KIAA0895Q8NCT3 520 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 NELFBQ8WX92 580 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 SLC5A5Q92911 643 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 DNAJC19Q96DA6 116 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 ZNF408Q9H9D4 720 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 POLD4Q9HCU8 107 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 SLC39A2Q9NP94 309 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 HOXC10Q9NYD6 342 aa12.7□□□□□ -0.38
LINC00562-201ENST00000566385 IPO5O00410 1097 aaKnown RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 FDX1P10109 184 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 MYCLP12524 364 aaPredicted RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 IDEP14735 1019 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 CDC25BP30305 580 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 NF2P35240 595 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 AMPD3Q01432 767 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 CTTNQ14247 550 aaKnown RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 SPATA1Q5VX52 437 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 ERO1BQ86YB8 467 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 TEX2Q8IWB9 1127 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 EIF2AK1Q9BQI3 630 aaKnown RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 NT5C3AQ9H0P0 336 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 BTBD7Q9P203 1132 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 WRAP73Q9P2S5 460 aaPredicted RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 A0A0G2JLL6 359 aaPredicted RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 IQCA1LA6NCM1 817 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 PLA2G4BP0C869 781 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 CDK11BP21127 795 aaKnown RBP12.69□□□□□ -0.38
LINC00562-201ENST00000566385 PPATQ06203 517 aa12.69□□□□□ -0.38
LINC00562-201ENST00000566385 PAK1Q13153 545 aa12.69□□□□□ -0.38
Retrieved 100 of 20,778 RNA–protein pairs in 34.7 ms