RNA–Protein interactions for RNA: ENST00000566093.1

CNEP1R1-207, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

TSL 4

Gene CNEP1R1, Length 547 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-207ENST00000566093 PUM1Q14671 1186 aaKnown RBP eCLIP4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 C2orf27AQ580R0 203 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 HHIPL2Q6UWX4 724 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 NLRP10Q86W26 655 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 FAM129CQ86XR2 697 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 SP8Q8IXZ3 490 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 SH3TC2Q8TF17 1288 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 TRMT2BQ96GJ1 504 aaKnown RBP4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 TMEM169Q96HH4 297 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 GPR27Q9NS67 375 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 SIT1Q9Y3P8 196 aa4.78□□□□□ -1.64
CNEP1R1-207ENST00000566093 MYO1BO43795 1136 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 CYBBP04839 570 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 C6orf222P0C671 652 aaPredicted RBP4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 SUMO1P63165 101 aaKnown RBP4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 PRR5P85299 388 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 PLP2Q04941 152 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 CBX2Q14781 532 aaPredicted RBP4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 STYK1Q6J9G0 422 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 PAQR3Q6TCH7 311 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 IFNL3Q8IZI9 196 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 RNPC3Q96LT9 517 aaKnown RBP4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 JAM3Q9BX67 310 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 CDIP1Q9H305 208 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 BCAS3Q9H6U6 928 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 CLDND1Q9NY35 253 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 DBR1Q9UK59 544 aaKnown RBP4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 PLA2G2DQ9UNK4 145 aa4.77□□□□□ -1.65
CNEP1R1-207ENST00000566093 ABLIM1O14639 778 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 SRGAP3O43295 1099 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 SUV39H1O43463 412 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 CDR1P51861 262 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 GTF2A2P52657 109 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 NR1I3Q14994 352 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 RTP5Q14D33 572 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 PLEKHN1Q494U1 663 aaPredicted RBP4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 WWC2Q6AWC2 1192 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 RSPO2Q6UXX9 243 aaPredicted RBP4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 LBX2Q6XYB7 198 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 TMC6Q7Z403 805 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 CABP7Q86V35 215 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 LINC01356Q8N9X3 169 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZSWIM2Q8NEG5 633 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 PTPRN2Q92932 1015 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 BDH2Q9BUT1 245 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 SIRT5Q9NXA8 310 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 PCDHA9Q9Y5H5 950 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 PCDHA8Q9Y5H6 950 aa4.76□□□□□ -1.65
CNEP1R1-207ENST00000566093 TTBK1Q5TCY1 1321 aaPredicted RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 ESYT3A0FGR9 886 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 H7BY64 318 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 PPP1R12AO14974 1030 aaPredicted RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 MAPKAPK2P49137 400 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 NCKAP1LP55160 1127 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 GPR85P60893 370 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZC3H12BQ5HYM0 836 aaKnown RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZFYVE27Q5T4F4 411 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 CNKSR3Q6P9H4 555 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZC3H14Q6PJT7 736 aaKnown RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 IGDCC3Q8IVU1 814 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 SLC7A14Q8TBB6 771 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 KCNJ15Q99712 375 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 CNOT11Q9UKZ1 510 aaKnown RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 MRPL42Q9Y6G3 142 aaKnown RBP4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 X6R8D5 127 aa4.75□□□□□ -1.65
CNEP1R1-207ENST00000566093 SGSM2O43147 1006 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 COL6A2P12110 1019 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 TNFRSF1AP19438 455 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 GABREP78334 506 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZNF200P98182 395 aaPredicted RBP4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 TMEM62Q0P6H9 643 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 JAZF1Q86VZ6 243 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 LDHDQ86WU2 507 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 Q8N1Y9 231 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 NETO2Q8NC67 525 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 MZB1Q8WU39 189 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 CLUHP3Q96NS8 147 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 ZFYVE21Q9BQ24 234 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 SLC52A2Q9HAB3 445 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 NDOR1Q9UHB4 597 aa4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 COA3Q9Y2R0 106 aaPredicted RBP4.74□□□□□ -1.65
CNEP1R1-207ENST00000566093 CCDC163A0A0D9SF12 145 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 LOC101059915A0A1B0GWI6 518 aaPredicted RBP4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 RAPGEF3O95398 923 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 CRTAMO95727 393 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 SOD2P04179 222 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 SRGAP2CP0DJJ0 459 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 CAP1Q01518 475 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 GUCY1A3Q02108 690 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 C21orf62-AS1Q17RA5 79 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 MROH9Q5TGP6 573 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 GIMAP6Q6P9H5 292 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 MAMDC2Q7Z304 686 aaPredicted RBP4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 MILR1Q7Z6M3 343 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 MTDHQ86UE4 582 aaKnown RBP4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 RIOX2Q8IUF8 465 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 PUM2Q8TB72 1066 aaKnown RBP eCLIP4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 PPIL4Q8WUA2 492 aaKnown RBP eCLIP4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 PEX11GQ96HA9 241 aa4.73□□□□□ -1.65
CNEP1R1-207ENST00000566093 SCLYQ96I15 445 aa4.73□□□□□ -1.65
Retrieved 100 of 20,778 RNA–protein pairs in 19.8 ms