RNA–Protein interactions for RNA: ENST00000565995.5

RNF40-208, Transcript of ring finger protein 40, humanhuman

TSL 4

Gene RNF40, Length 586 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RNF40-208ENST00000565995 CHMP4BP1P59074 171 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 HIC1Q14526 733 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 CDC37Q16543 378 aaPredicted RBP14.92□□□□□ -0.02
RNF40-208ENST00000565995 PLEKHG4Q58EX7 1191 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 CCDC178Q5BJE1 867 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 MYSM1Q5VVJ2 828 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 PTCRAQ6ISU1 281 aaPredicted RBP14.92□□□□□ -0.02
RNF40-208ENST00000565995 KCNV1Q6PIU1 500 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 LIN28BQ6ZN17 250 aaKnown RBP eCLIP14.92□□□□□ -0.027e-7■■■■□ 22.4
RNF40-208ENST00000565995 CHST3Q7LGC8 479 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 SERINC5Q86VE9 423 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 ADGRF4Q8IZF3 695 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 FBXO22Q8NEZ5 403 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 FAM227BQ96M60 508 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 UBA5Q9GZZ9 404 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 KCNH6Q9H252 994 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 MAP3K20Q9NYL2 800 aaKnown RBP14.92□□□□□ -0.02
RNF40-208ENST00000565995 MTUS1Q9ULD2 1270 aa14.92□□□□□ -0.02
RNF40-208ENST00000565995 H3BNC9 293 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 GOLGA8HP0CJ92 632 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 IL9P15248 144 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 KCNA5P22460 613 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 HSD17B4P51659 736 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 PDE1AP54750 535 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 SAMD3Q8N6K7 520 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 ESR2Q92731 530 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 C17orf80Q9BSJ5 609 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 ALG1Q9BT22 464 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 CPVLQ9H3G5 476 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 RNF41Q9H4P4 317 aaPredicted RBP14.91□□□□□ -0.02
RNF40-208ENST00000565995 PXMP2Q9NR77 195 aa14.91□□□□□ -0.02
RNF40-208ENST00000565995 MRPL11Q9Y3B7 192 aaKnown RBP14.91□□□□□ -0.02
RNF40-208ENST00000565995 C19orf67A6NJJ6 358 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 RGS20O76081 388 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 AMHP03971 560 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 TGFB3P10600 412 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 HAND2P61296 217 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 ZNF200P98182 395 aaPredicted RBP14.9□□□□□ -0.02
RNF40-208ENST00000565995 PTPROQ16827 1216 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 EPC2Q52LR7 807 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 ASPRV1Q53RT3 343 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 ARHGEF16Q5VV41 709 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 STOX1Q6ZVD7 989 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 ZNF589Q86UQ0 364 aaPredicted RBP14.9□□□□□ -0.02
RNF40-208ENST00000565995 TBC1D10CQ8IV04 446 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 DHX37Q8IY37 1157 aaKnown RBP14.9□□□□□ -0.02
RNF40-208ENST00000565995 PNMA1Q8ND90 353 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 DBF4BQ8NFT6 615 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 TOP1MTQ969P6 601 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 C16orf70Q9BSU1 422 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 JMJD4Q9H9V9 463 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 PRKAG3Q9UGI9 489 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 CCDC171Q6TFL3 1326 aa14.9□□□□□ -0.02
RNF40-208ENST00000565995 RSPH10B2B2RC85 870 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 OPLAHO14841 1288 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 RSPH10BP0C881 870 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 ZNF286BP0CG31 522 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 QRICH1Q2TAL8 776 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 CELF3Q5SZQ8 465 aaKnown RBP14.89□□□□□ -0.03
RNF40-208ENST00000565995 FBXO11Q86XK2 927 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 PABPC5Q96DU9 382 aaKnown RBP14.89□□□□□ -0.03
RNF40-208ENST00000565995 MRVI1Q9Y6F6 885 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 TECTAO75443 2155 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 NEDD4P46934 1319 aa14.89□□□□□ -0.03
RNF40-208ENST00000565995 USP34Q70CQ2 3546 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 CAND2O75155 1236 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 NMIQ13287 307 aaPredicted RBP14.88□□□□□ -0.03
RNF40-208ENST00000565995 HSDL1Q3SXM5 330 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 TIGD5Q53EQ6 642 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 FAM117BQ6P1L5 589 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 ALYREFQ86V81 257 aaKnown RBP14.88□□□□□ -0.03
RNF40-208ENST00000565995 VSIG10LQ86VR7 867 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 IQCA1Q86XH1 822 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 BANK1Q8NDB2 785 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 MTMR8Q96EF0 704 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 CRBNQ96SW2 442 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 PDCD2LQ9BRP1 358 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 ZKSCAN3Q9BRR0 538 aa14.88□□□□□ -0.03
RNF40-208ENST00000565995 DCXO43602 365 aa14.87□□□□□ -0.03
RNF40-208ENST00000565995 EIF2AK2P19525 551 aaKnown RBP14.87□□□□□ -0.03
RNF40-208ENST00000565995 MFAP1P55081 439 aaKnown RBP14.87□□□□□ -0.03
RNF40-208ENST00000565995 SP2Q02086 613 aa14.87□□□□□ -0.03
RNF40-208ENST00000565995 FAM50BQ9Y247 325 aa14.87□□□□□ -0.03
RNF40-208ENST00000565995 KMT2EQ8IZD2 1858 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 PLXNA4Q9HCM2 1894 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 LOC101059915A0A1B0GWI6 518 aaPredicted RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 C5orf67F2Z3F1 127 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ZNF213O14771 459 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 NCK2O43639 380 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 CFBP00751 764 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 PARP1P09874 1014 aaKnown RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 SSTR3P32745 418 aaPredicted RBP14.86□□□□□ -0.03
RNF40-208ENST00000565995 THPOP40225 353 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ZP2Q05996 745 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 GPM6BQ13491 265 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 CTC1Q2NKJ3 1217 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ANKRD45Q5TZF3 282 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 TMEM192Q8IY95 271 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 MYOCDQ8IZQ8 938 aa14.86□□□□□ -0.03
RNF40-208ENST00000565995 ENAHQ8N8S7 591 aaPredicted RBP14.86□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 20.3 ms