RNA–Protein interactions for RNA: ENST00000565966.5

HERPUD1-210, Transcript of homocysteine inducible ER protein with ubiquitin like domain 1, humanhuman

TSL 5

Gene HERPUD1, Length 798 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HERPUD1-210ENST00000565966 FOSP01100 380 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 MYL3P08590 195 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 CLTBP09497 229 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 ICAM3P32942 547 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 ITGA7Q13683 1181 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 DHX37Q8IY37 1157 aaKnown RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 SLC43A3Q8NBI5 491 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 CCDC12Q8WUD4 166 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 AFG1LQ8WV93 481 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 INPP4AQ96PE3 977 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 GDF15Q99988 308 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 MTG1Q9BT17 334 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 PRO3102Q9H379 93 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 PRDM5Q9NQX1 630 aaPredicted RBP15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 PDLIM7Q9NR12 457 aa15.84■□□□□ 0.13
HERPUD1-210ENST00000565966 ESYT2A0FGR8 921 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 TLR3O15455 904 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 DTNBO60941 627 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 DEXIO95424 95 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 MMP3P08254 477 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 BMP8BP34820 402 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 MAGEA10P43363 369 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 SP2Q02086 613 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 FAAP100Q0VG06 881 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 ST3GAL1Q11201 340 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 CELF3Q5SZQ8 465 aaKnown RBP15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 MYSM1Q5VVJ2 828 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 NLRX1Q86UT6 975 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 LBHD1Q9BQE6 289 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 ZMYND12Q9H0C1 365 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 TMEM39AQ9NV64 488 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 TRIP12Q14669 1992 aaPredicted RBP15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 GRIN2DO15399 1336 aa15.83■□□□□ 0.12
HERPUD1-210ENST00000565966 TRIM43BA6NCK2 446 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 SPATA31C2B4DYI2 1134 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 ADAMTS3O15072 1205 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 FIBPO43427 364 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 GGPS1O95749 300 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 GNA11P29992 359 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 CLK2P49760 499 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 PSMC6P62333 389 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 AP3B2Q13367 1082 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 NEDD9Q14511 834 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 DGKDQ16760 1214 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 HABP4Q5JVS0 413 aaKnown RBP15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 SH3RF1Q7Z6J0 888 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 FAM126BQ8IXS8 530 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 PPTC7Q8NI37 304 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 TRIM43Q96BQ3 446 aaPredicted RBP15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 AIFM3Q96NN9 605 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 MLXIPQ9HAP2 919 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 C6orf50Q9HD87 102 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 SH3GLB2Q9NR46 395 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 VPS54Q9P1Q0 977 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 STK36Q9NRP7 1315 aa15.82■□□□□ 0.12
HERPUD1-210ENST00000565966 KIAA0355O15063 1070 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 PPFIA4O75335 1185 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 UBA1P22314 1058 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 MDM2Q00987 491 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 SEMA3FQ13275 785 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 MCTP2Q6DN12 878 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 NSUN7Q8NE18 718 aaKnown RBP15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 IL27Q8NEV9 243 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 CCDC148Q8NFR7 591 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 GPRASP2Q96D09 838 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 CDHR1Q96JP9 859 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 ZSCAN31Q96LW9 406 aaPredicted RBP15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 SENP7Q9BQF6 1050 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 ANO3Q9BYT9 981 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 TMEM260Q9NX78 707 aa15.81■□□□□ 0.12
HERPUD1-210ENST00000565966 A0A1W2PPC1 479 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 MAFGO15525 162 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 ST18O60284 1047 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 CD4P01730 458 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 FDPSP14324 419 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 RAG1P15918 1043 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 NBPF20Q3BBV1 942 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 HSDL1Q3SXM5 330 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 CCDC83Q8IWF9 413 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 BICD2Q8TD16 824 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 PGBD1Q96JS3 809 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 SPATA33Q96N06 139 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 UBE2OQ9C0C9 1292 aaKnown RBP15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 PCDH10Q9P2E7 1040 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 ORC3Q9UBD5 711 aaPredicted RBP15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 UBIAD1Q9Y5Z9 338 aa15.8■□□□□ 0.12
HERPUD1-210ENST00000565966 RANBP2P49792 3224 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 JAK2O60674 1132 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 CD2BP2O95400 341 aaKnown RBP15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 ITGB5P18084 799 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 JAKMIP3Q5VZ66 844 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 NFRKBQ6P4R8 1299 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 METTL7BQ6UX53 244 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 CYFIP1Q7L576 1253 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 GIMAP8Q8ND71 665 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 BADQ92934 168 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 JADE2Q9NQC1 790 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 SH2B1Q9NRF2 756 aaPredicted RBP15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 TBX21Q9UL17 535 aa15.79■□□□□ 0.12
HERPUD1-210ENST00000565966 SORBS3O60504 671 aa15.78■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 18.6 ms