RNA–Protein interactions for RNA: ENST00000565666.5

CMTM3-210, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

TSL 3 BASIC

Gene CMTM3, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-210ENST00000565666 TMEM39AQ9NV64 488 aa21.43■■□□□ 1.02
CMTM3-210ENST00000565666 TPCN1Q9ULQ1 816 aa21.43■■□□□ 1.02
CMTM3-210ENST00000565666 LTBP2Q14767 1821 aa21.43■■□□□ 1.02
CMTM3-210ENST00000565666 FAAP100Q0VG06 881 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 AP3B2Q13367 1082 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 CELF3Q5SZQ8 465 aaKnown RBP21.42■■□□□ 1.02
CMTM3-210ENST00000565666 CCDC148Q8NFR7 591 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 EMID1Q96A84 441 aaPredicted RBP21.42■■□□□ 1.02
CMTM3-210ENST00000565666 SEZ6LQ9BYH1 1024 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 ANO3Q9BYT9 981 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 MLXIPQ9HAP2 919 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 TMEM260Q9NX78 707 aa21.42■■□□□ 1.02
CMTM3-210ENST00000565666 CEP290O15078 2479 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 ESYT2A0FGR8 921 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 TRIM43BA6NCK2 446 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 ICAM3P32942 547 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 CHMP4BP1P59074 171 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 SP2Q02086 613 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 DGKDQ16760 1214 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 HABP4Q5JVS0 413 aaKnown RBP21.41■■□□□ 1.02
CMTM3-210ENST00000565666 FAM126BQ8IXS8 530 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 SLC43A3Q8NBI5 491 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 TRIM43Q96BQ3 446 aaPredicted RBP21.41■■□□□ 1.02
CMTM3-210ENST00000565666 SPATA33Q96N06 139 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 ZMYND12Q9H0C1 365 aa21.41■■□□□ 1.02
CMTM3-210ENST00000565666 GRIN2DO15399 1336 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 SPATA31C2B4DYI2 1134 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 PFKFB2O60825 505 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 CDKL5O76039 1030 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 DEXIO95424 95 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 RAG1P15918 1043 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 GNA11P29992 359 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 SCRN1Q12765 414 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 NEDD9Q14511 834 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 FAM47CQ5HY64 1035 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 MYSM1Q5VVJ2 828 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 JAKMIP3Q5VZ66 844 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 PPTC7Q8NI37 304 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 GPRASP2Q96D09 838 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 UBE2OQ9C0C9 1292 aaKnown RBP21.4■■□□□ 1.02
CMTM3-210ENST00000565666 VPS54Q9P1Q0 977 aa21.4■■□□□ 1.02
CMTM3-210ENST00000565666 DOCK5Q9H7D0 1870 aa21.39■■□□□ 1.02
CMTM3-210ENST00000565666 KIAA0355O15063 1070 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 BMP8BP34820 402 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 CLK2P49760 499 aaKnown RBP21.39■■□□□ 1.01
CMTM3-210ENST00000565666 MCTP2Q6DN12 878 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 REXO1Q8N1G1 1221 aaKnown RBP21.39■■□□□ 1.01
CMTM3-210ENST00000565666 BICD2Q8TD16 824 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 CDHR1Q96JP9 859 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 PRO3102Q9H379 93 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 UBIAD1Q9Y5Z9 338 aa21.39■■□□□ 1.01
CMTM3-210ENST00000565666 NOP56O00567 594 aaKnown RBP21.38■■□□□ 1.01
CMTM3-210ENST00000565666 NLRP5P59047 1200 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 SEMA3FQ13275 785 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 MTMR1Q13613 665 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 NBPF20Q3BBV1 942 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 HSDL1Q3SXM5 330 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 CYFIP1Q7L576 1253 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 BADQ92934 168 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 C22orf23Q9BZE7 217 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 SH3GLB2Q9NR46 395 aa21.38■■□□□ 1.01
CMTM3-210ENST00000565666 SCN10AQ9Y5Y9 1956 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 ITGB5P18084 799 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 ZNF76P36508 570 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 SREBF1P36956 1147 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 GIMAP8Q8ND71 665 aaPredicted RBP21.37■■□□□ 1.01
CMTM3-210ENST00000565666 UPF2Q9HAU5 1272 aaKnown RBP21.37■■□□□ 1.01
CMTM3-210ENST00000565666 JADE2Q9NQC1 790 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 PKD2L1Q9P0L9 805 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 DNAH12Q6ZR08 3092 aa21.37■■□□□ 1.01
CMTM3-210ENST00000565666 B4GALT4O60513 344 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 PPFIA4O75335 1185 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 CD4P01730 458 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 ZNF286BP0CG31 522 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 NFRKBQ6P4R8 1299 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 METTL7BQ6UX53 244 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 PPP1R13LQ8WUF5 828 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 SENP7Q9BQF6 1050 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 MXRA8Q9BRK3 442 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 KATNAL1Q9BW62 490 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 PPP1R12CQ9BZL4 782 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 TRPV6Q9H1D0 765 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 BCAS3Q9H6U6 928 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 TBX21Q9UL17 535 aa21.36■■□□□ 1.01
CMTM3-210ENST00000565666 A0A1W2PPC1 479 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 MAFGO15525 162 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 SUPT20HL2P0C7V6 817 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 ITGB8P26012 769 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 ARHGAP4P98171 946 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 SP4Q02446 784 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 ME3Q16798 604 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 NECAB1Q8N987 351 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 RASGRP4Q8TDF6 673 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 ALG1Q9BT22 464 aa21.35■■□□□ 1.01
CMTM3-210ENST00000565666 STK36Q9NRP7 1315 aa21.34■■□□□ 1.01
CMTM3-210ENST00000565666 ADAMTS3O15072 1205 aa21.34■■□□□ 1.01
CMTM3-210ENST00000565666 LARGE1O95461 756 aa21.34■■□□□ 1.01
CMTM3-210ENST00000565666 TIMP1P01033 207 aa21.34■■□□□ 1.01
CMTM3-210ENST00000565666 PSEN2P49810 448 aa21.34■■□□□ 1.01
CMTM3-210ENST00000565666 PTPN11Q06124 597 aaPredicted RBP21.34■■□□□ 1.01
Retrieved 100 of 20,778 RNA–protein pairs in 15.8 ms