RNA–Protein interactions for RNA: ENST00000565559.5

CAPN3-215, Transcript of calpain 3, humanhuman

TSL 3

Gene CAPN3, Length 711 nt, Biotype protein coding, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CAPN3-215ENST00000565559 PPP2R3CQ969Q6 453 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 MKL1Q969V6 931 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 LMAN2LQ9H0V9 348 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 SLC4A4Q9Y6R1 1079 aa13.21□□□□□ -0.29
CAPN3-215ENST00000565559 EPG5Q9HCE0 2579 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 LOC730098B7Z3J9 87 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 TTLL1O95922 423 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 RASA1P20936 1047 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 NDUFV1P49821 464 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 PDE4BQ07343 736 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 MUM1L1Q5H9M0 696 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 DMRTA1Q5VZB9 504 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 C7orf31Q8N865 590 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 STAG1Q8WVM7 1258 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 DHX38Q92620 1227 aaKnown RBP13.2□□□□□ -0.3
CAPN3-215ENST00000565559 NKD2Q969F2 451 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-215ENST00000565559 CLUAP1Q96AJ1 413 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 C11orf84Q9BUA3 381 aaPredicted RBP13.2□□□□□ -0.3
CAPN3-215ENST00000565559 DDX24Q9GZR7 859 aaKnown RBP eCLIP13.2□□□□□ -0.3
CAPN3-215ENST00000565559 IGFLR1Q9H665 355 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 ZNF287Q9HBT7 754 aa13.2□□□□□ -0.3
CAPN3-215ENST00000565559 KMT2EQ8IZD2 1858 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 TBX10O75333 385 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 TXNP10599 105 aaKnown RBP13.19□□□□□ -0.3
CAPN3-215ENST00000565559 CTNNB1P35222 781 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 SLC1A4P43007 532 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 PDE4DQ08499 809 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 PTK7Q13308 1070 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 ERC1Q8IUD2 1116 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 ZNF444Q8N0Y2 327 aaPredicted RBP13.19□□□□□ -0.3
CAPN3-215ENST00000565559 ADSSL1Q8N142 457 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 ASIC4Q96FT7 647 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 PURBQ96QR8 312 aaKnown RBP13.19□□□□□ -0.3
CAPN3-215ENST00000565559 CTAGE1Q96RT6 745 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 CCPG1Q9ULG6 757 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 TNNQ9UQP3 1299 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 RWDD3Q9Y3V2 267 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 GVINP1Q7Z2Y8 2422 aa13.19□□□□□ -0.3
CAPN3-215ENST00000565559 B4DLN1 442 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 UPP2O95045 317 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 EYA4O95677 639 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 RB1P06400 928 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 ADD2P35612 726 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 MRPL12P52815 198 aaKnown RBP13.18□□□□□ -0.3
CAPN3-215ENST00000565559 BAATQ14032 418 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-215ENST00000565559 CBX2Q14781 532 aaPredicted RBP13.18□□□□□ -0.3
CAPN3-215ENST00000565559 ZNF618Q5T7W0 954 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 FTSJ3Q8IY81 847 aaKnown RBP13.18□□□□□ -0.3
CAPN3-215ENST00000565559 STK11IPQ8N1F8 1099 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 TMEM57Q8N5G2 664 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 DBF4BQ8NFT6 615 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 CEP95Q96GE4 821 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 MTMR4Q9NYA4 1195 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 GTF2IRD1Q9UHL9 959 aa13.18□□□□□ -0.3
CAPN3-215ENST00000565559 MYO15AQ9UKN7 3530 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 IGKV6D-41A0A0C4DH26 115 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 PTPDC1A2A3K4 754 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 KRT37O76014 449 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 CASTP20810 708 aaKnown RBP13.17□□□□□ -0.3
CAPN3-215ENST00000565559 DGLUCYQ7Z3D6 616 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 ZBTB33Q86T24 672 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 FIBCD1Q8N539 461 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 SEPT8Q92599 483 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 COPS5Q92905 334 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 TOP1MTQ969P6 601 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 GMCL1Q96IK5 515 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 KATNAL1Q9BW62 490 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 IFIH1Q9BYX4 1025 aaKnown RBP13.17□□□□□ -0.3
CAPN3-215ENST00000565559 CACNA1GO43497 2377 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 COL4A6Q14031 1691 aa13.17□□□□□ -0.3
CAPN3-215ENST00000565559 BAZ2AQ9UIF9 1905 aaKnown RBP13.16□□□□□ -0.3
CAPN3-215ENST00000565559 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-215ENST00000565559 C5orf67F2Z3F1 127 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 MAP3K7O43318 606 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 MMP3P08254 477 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 RLBP1P12271 317 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 ICAM3P32942 547 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 ADAM15Q13444 863 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 MBTPS1Q14703 1052 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 TSR1Q2NL82 804 aaKnown RBP13.16□□□□□ -0.3
CAPN3-215ENST00000565559 SBK1Q52WX2 424 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 C6orf132Q5T0Z8 1188 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 SMRP1Q8NCR6 262 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 AFG1LQ8WV93 481 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 IL17RAQ96F46 866 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 MSLNLQ96KJ4 702 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 RPGRIP1Q96KN7 1286 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 PHF7Q9BWX1 381 aaPredicted RBP13.16□□□□□ -0.3
CAPN3-215ENST00000565559 INCENPQ9NQS7 918 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 PLXNA3P51805 1871 aa13.16□□□□□ -0.3
CAPN3-215ENST00000565559 GREB1LQ9C091 1923 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-215ENST00000565559 TRIP12Q14669 1992 aaPredicted RBP13.15□□□□□ -0.3
CAPN3-215ENST00000565559 MINDY4BA8MYZ0 360 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 RSPH10B2B2RC85 870 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 GRM6O15303 877 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 LINC01565O15544 149 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 PLA2G6O60733 806 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 CSPG5O95196 566 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 ICAM1P05362 532 aa13.15□□□□□ -0.3
CAPN3-215ENST00000565559 RSPH10BP0C881 870 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 100.6 ms