RNA–Protein interactions for RNA: ENST00000565517.5

COMMD4-212, Transcript of COMM domain containing 4, humanhuman

TSL 4

Gene COMMD4, Length 536 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COMMD4-212ENST00000565517 SH3GLB2Q9NR46 395 aa17.68■□□□□ 0.42
COMMD4-212ENST00000565517 RTEL1Q9NZ71 1219 aa17.68■□□□□ 0.42
COMMD4-212ENST00000565517 TPCN1Q9ULQ1 816 aa17.68■□□□□ 0.42
COMMD4-212ENST00000565517 GRIN2DO15399 1336 aa17.68■□□□□ 0.42
COMMD4-212ENST00000565517 DOCK5Q9H7D0 1870 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 KIAA0355O15063 1070 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 PFKFB2O60825 505 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 MMP3P08254 477 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 MYL3P08590 195 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 GNA11P29992 359 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 MAGEA10P43363 369 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-212ENST00000565517 NEK4P51957 841 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 SP2Q02086 613 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 FAAP100Q0VG06 881 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 STK3Q13188 491 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 NEDD9Q14511 834 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 DGKDQ16760 1214 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 FAM126BQ8IXS8 530 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 FAM177A1Q8N128 213 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-212ENST00000565517 CCDC148Q8NFR7 591 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 GPRASP2Q96D09 838 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 ZFP91Q96JP5 570 aaPredicted RBP17.67■□□□□ 0.42
COMMD4-212ENST00000565517 CDHR1Q96JP9 859 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 SENP7Q9BQF6 1050 aa17.67■□□□□ 0.42
COMMD4-212ENST00000565517 A0A1W2PPC1 479 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 TLR3O15455 904 aaKnown RBP17.66■□□□□ 0.42
COMMD4-212ENST00000565517 MAFGO15525 162 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 PPFIA4O75335 1185 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 CDKL5O76039 1030 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 DEXIO95424 95 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 GGPS1O95749 300 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 CD4P01730 458 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 HOXD8P13378 290 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-212ENST00000565517 UBA1P22314 1058 aaKnown RBP17.66■□□□□ 0.42
COMMD4-212ENST00000565517 SCRN1Q12765 414 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 SEMA3FQ13275 785 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 SH3RF1Q7Z6J0 888 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 BICD2Q8TD16 824 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 LBHD1Q9BQE6 289 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-212ENST00000565517 PRDM5Q9NQX1 630 aaPredicted RBP17.66■□□□□ 0.42
COMMD4-212ENST00000565517 UBIAD1Q9Y5Z9 338 aa17.66■□□□□ 0.42
COMMD4-212ENST00000565517 TRIM43BA6NCK2 446 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 PSMC6P62333 389 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 HABP4Q5JVS0 413 aaKnown RBP17.65■□□□□ 0.42
COMMD4-212ENST00000565517 NFRKBQ6P4R8 1299 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 GIMAP8Q8ND71 665 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-212ENST00000565517 TRIM43Q96BQ3 446 aaPredicted RBP17.65■□□□□ 0.42
COMMD4-212ENST00000565517 ANO3Q9BYT9 981 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 MLXIPQ9HAP2 919 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 TMEM39AQ9NV64 488 aa17.65■□□□□ 0.42
COMMD4-212ENST00000565517 PPFIA3O75145 1194 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 ITGB5P18084 799 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 SREBF1P36956 1147 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 RBM25P49756 843 aaKnown RBP17.64■□□□□ 0.41
COMMD4-212ENST00000565517 PTPN11Q06124 597 aaPredicted RBP17.64■□□□□ 0.41
COMMD4-212ENST00000565517 HSDL1Q3SXM5 330 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 METTL7BQ6UX53 244 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 REXO1Q8N1G1 1221 aaKnown RBP17.64■□□□□ 0.41
COMMD4-212ENST00000565517 SPATA33Q96N06 139 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 C22orf23Q9BZE7 217 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 JADE2Q9NQC1 790 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 TBX21Q9UL17 535 aa17.64■□□□□ 0.41
COMMD4-212ENST00000565517 MDM2Q00987 491 aaPredicted RBP17.63■□□□□ 0.41
COMMD4-212ENST00000565517 NBPF20Q3BBV1 942 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 KAT2BQ92831 832 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 MXRA8Q9BRK3 442 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 TMEM260Q9NX78 707 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 VPS54Q9P1Q0 977 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 STK36Q9NRP7 1315 aa17.63■□□□□ 0.41
COMMD4-212ENST00000565517 TIMP1P01033 207 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 CYP3A4P08684 503 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 SUPT20HL2P0C7V6 817 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 RAG1P15918 1043 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 ARHGAP4P98171 946 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 MTMR1Q13613 665 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 ME3Q16798 604 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 CEP55Q53EZ4 464 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 JAKMIP3Q5VZ66 844 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 GALNT17Q6IS24 598 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 CYFIP1Q7L576 1253 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 IL27Q8NEV9 243 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 CRYGNQ8WXF5 182 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 PGBD1Q96JS3 809 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 KIF2CQ99661 725 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 KATNAL1Q9BW62 490 aa17.62■□□□□ 0.41
COMMD4-212ENST00000565517 UBE2OQ9C0C9 1292 aaKnown RBP17.62■□□□□ 0.41
COMMD4-212ENST00000565517 HAS3O00219 553 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 B4GALT4O60513 344 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 F2P00734 622 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 KCNA2P16389 499 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 ITGB8P26012 769 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 NLRP5P59047 1200 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 NIPA1Q7RTP0 329 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 SESTD1Q86VW0 696 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 BADQ92934 168 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 GTF3C6Q969F1 213 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 BCAS3Q9H6U6 928 aa17.61■□□□□ 0.41
COMMD4-212ENST00000565517 MEIS1O00470 390 aa17.6■□□□□ 0.41
COMMD4-212ENST00000565517 NOP56O00567 594 aaKnown RBP17.6■□□□□ 0.41
COMMD4-212ENST00000565517 ADAMTS3O15072 1205 aa17.6■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 13.8 ms