RNA–Protein interactions for RNA: ENST00000564676.5

CDH1-206, Transcript of cadherin 1, humanhuman

TSL 1 (best)

Gene CDH1, Length 969 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDH1-206ENST00000564676 TEX2Q8IWB9 1127 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 DHX37Q8IY37 1157 aaKnown RBP11.39□□□□□ -0.59
CDH1-206ENST00000564676 AFG1LQ8WV93 481 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 MTG1Q9BT17 334 aaPredicted RBP11.39□□□□□ -0.59
CDH1-206ENST00000564676 C6orf50Q9HD87 102 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 MYH7BA7E2Y1 1941 aa11.39□□□□□ -0.59
CDH1-206ENST00000564676 MROH7Q68CQ1 1323 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 A6NJR5 290 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 SORBS3O60504 671 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 PFKFB2O60825 505 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 CDKL5O76039 1030 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 GGPS1O95749 300 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 FOSP01100 380 aaPredicted RBP11.38□□□□□ -0.59
CDH1-206ENST00000564676 GNA11P29992 359 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 PSMC6P62333 389 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 ARHGAP1Q07960 439 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 SCRN1Q12765 414 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 ITGA7Q13683 1181 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 JAKMIP3Q5VZ66 844 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 CCDC148Q8NFR7 591 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 PGBD1Q96JS3 809 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 TOX2Q96NM4 488 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 LBHD1Q9BQE6 289 aaPredicted RBP11.38□□□□□ -0.59
CDH1-206ENST00000564676 ANO3Q9BYT9 981 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 C22orf23Q9BZE7 217 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 MLXIPQ9HAP2 919 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 UPF2Q9HAU5 1272 aaKnown RBP11.38□□□□□ -0.59
CDH1-206ENST00000564676 VPS54Q9P1Q0 977 aa11.38□□□□□ -0.59
CDH1-206ENST00000564676 COLQQ9Y215 455 aaPredicted RBP11.38□□□□□ -0.59
CDH1-206ENST00000564676 ESYT2A0FGR8 921 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 SPATA31C2B4DYI2 1134 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 TLR3O15455 904 aaKnown RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 FIBPO43427 364 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 DEXIO95424 95 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 MMP3P08254 477 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 CLTBP09497 229 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 UBA1P22314 1058 aaKnown RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 ICAM3P32942 547 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 MAGEA10P43363 369 aaPredicted RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 CDK7P50613 346 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 NLRP5P59047 1200 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 CHMP4BP1P59074 171 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 PURAQ00577 322 aaKnown RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 AP3B2Q13367 1082 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 NEDD9Q14511 834 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 DGKDQ16760 1214 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 CELF3Q5SZQ8 465 aaKnown RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 ANKRD33Q7Z3H0 272 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 EMID1Q96A84 441 aaPredicted RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 SPATA33Q96N06 139 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 INPP4AQ96PE3 977 aaPredicted RBP11.37□□□□□ -0.59
CDH1-206ENST00000564676 SEZ6LQ9BYH1 1024 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 ZMYND12Q9H0C1 365 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 PDLIM7Q9NR12 457 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 TMEM39AQ9NV64 488 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 TMEM260Q9NX78 707 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 GTF3C3Q9Y5Q9 886 aa11.37□□□□□ -0.59
CDH1-206ENST00000564676 ZNF76P36508 570 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 MDM2Q00987 491 aaPredicted RBP11.36□□□□□ -0.59
CDH1-206ENST00000564676 SP2Q02086 613 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 ME3Q16798 604 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 MYSM1Q5VVJ2 828 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 SH3RF1Q7Z6J0 888 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 REXO1Q8N1G1 1221 aaKnown RBP11.36□□□□□ -0.59
CDH1-206ENST00000564676 NECAB1Q8N987 351 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 PPTC7Q8NI37 304 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 BICD2Q8TD16 824 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 GPRASP2Q96D09 838 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 CDHR1Q96JP9 859 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 PCDH10Q9P2E7 1040 aa11.36□□□□□ -0.59
CDH1-206ENST00000564676 GRIN2DO15399 1336 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 TRIM43BA6NCK2 446 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 NOP56O00567 594 aaKnown RBP11.35□□□□□ -0.59
CDH1-206ENST00000564676 RAG1P15918 1043 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 ITGB5P18084 799 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 CLK2P49760 499 aaKnown RBP11.35□□□□□ -0.59
CDH1-206ENST00000564676 FAAP100Q0VG06 881 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 SEMA3FQ13275 785 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 NBPF20Q3BBV1 942 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 FAM47CQ5HY64 1035 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 MCTP2Q6DN12 878 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 METTL7BQ6UX53 244 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 CYFIP1Q7L576 1253 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 FAM126BQ8IXS8 530 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 SLC43A3Q8NBI5 491 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 TRIM43Q96BQ3 446 aaPredicted RBP11.35□□□□□ -0.59
CDH1-206ENST00000564676 GDF15Q99988 308 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 SENP7Q9BQF6 1050 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 MXRA8Q9BRK3 442 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 UBE2OQ9C0C9 1292 aaKnown RBP11.35□□□□□ -0.59
CDH1-206ENST00000564676 JADE2Q9NQC1 790 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 SH3GLB2Q9NR46 395 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 PKD2L1Q9P0L9 805 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 UBIAD1Q9Y5Z9 338 aa11.35□□□□□ -0.59
CDH1-206ENST00000564676 KIAA0355O15063 1070 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 MAFGO15525 162 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 PPFIA4O75335 1185 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 LARGE1O95461 756 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 XBP1P17861 261 aa11.34□□□□□ -0.59
CDH1-206ENST00000564676 SREBF1P36956 1147 aa11.34□□□□□ -0.59
Retrieved 100 of 20,778 RNA–protein pairs in 31 ms