RNA–Protein interactions for RNA: ENST00000564664.5

GTF3C1-204, Transcript of general transcription factor IIIC subunit 1, humanhuman

TSL 5

Gene GTF3C1, Length 933 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GTF3C1-204ENST00000564664 PTK7Q13308 1070 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 NEDD9Q14511 834 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 MFSD10Q14728 455 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 NECTIN1Q15223 517 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 KIAA0753Q2KHM9 967 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 FCHSD1Q86WN1 690 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 TEX2Q8IWB9 1127 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 ESYT1Q9BSJ8 1104 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 NKX2-4Q9H2Z4 354 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 MLXIPQ9HAP2 919 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 HDAC6Q9UBN7 1215 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 SEC63Q9UGP8 760 aaKnown RBP14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 UNC80Q8N2C7 3258 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 FRMPD4Q14CM0 1322 aa14.07□□□□□ -0.16
GTF3C1-204ENST00000564664 CCDC69A6NI79 296 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 SPATA31C2B4DYI2 1134 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 EFCAB14O75071 495 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 GGPS1O95749 300 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 CXCL10P02778 98 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 SP2Q02086 613 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 HSDL1Q3SXM5 330 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 BMP2KLQ5H9B9 411 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 RNF20Q5VTR2 975 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 NFXL1Q6ZNB6 911 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 LRRC8DQ7L1W4 858 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 INPP4AQ96PE3 977 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 CTAGE1Q96RT6 745 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 SENP7Q9BQF6 1050 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 COL25A1Q9BXS0 654 aaPredicted RBP14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 USP26Q9BXU7 913 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 PRDM12Q9H4Q4 367 aa14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 YBX2Q9Y2T7 364 aaKnown RBP14.06□□□□□ -0.16
GTF3C1-204ENST00000564664 SH2B2O14492 632 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 SLC27A2O14975 620 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 CKBP12277 381 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 POU3F3P20264 500 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 UBA1P22314 1058 aaKnown RBP14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 RABGGTBP53611 331 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 PPP2R2DQ66LE6 453 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 CREB3L3Q68CJ9 461 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 METTL7BQ6UX53 244 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 CENPQQ7L2Z9 268 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 SGMS1Q86VZ5 419 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 GIMAP8Q8ND71 665 aaPredicted RBP14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 IL31RAQ8NI17 732 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 SMARCC2Q8TAQ2 1214 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 ALG1Q9BT22 464 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 SLC12A7Q9Y666 1083 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 MYH7BA7E2Y1 1941 aa14.05□□□□□ -0.16
GTF3C1-204ENST00000564664 TRIP12Q14669 1992 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 ABHD14A-ACY1A0A1B0GW23 586 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 H3BRB1 525 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 FIBPO43427 364 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 GNAT1P11488 350 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 KCNJ6P48051 423 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 MRPS9P82933 396 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 PCNX4Q63HM2 1172 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 CNKSR3Q6P9H4 555 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 SYNE3Q6ZMZ3 975 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 NLRX1Q86UT6 975 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 SRBD1Q8N5C6 995 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 FANCBQ8NB91 859 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 ATXN2LQ8WWM7 1075 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 CDHR1Q96JP9 859 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 C16orf70Q9BSU1 422 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 TSPYL2Q9H2G4 693 aaPredicted RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 TUT1Q9H6E5 874 aaKnown RBP14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 PSTPIP2Q9H939 334 aa14.04□□□□□ -0.16
GTF3C1-204ENST00000564664 NOP56O00567 594 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 MEIS2O14770 477 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 CAND2O75155 1236 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 ZNF286BP0CG31 522 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 TSGA10IPQ3SY00 556 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 HERC6Q8IVU3 1022 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 PPP1R13LQ8WUF5 828 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 DHX38Q92620 1227 aaKnown RBP14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 ANO2Q9NQ90 1003 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 EMSYQ7Z589 1322 aa14.03□□□□□ -0.16
GTF3C1-204ENST00000564664 MAFGO15525 162 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 MYOGP15173 224 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 IGFBP4P22692 258 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 HOXC8P31273 242 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 IKBKEQ14164 716 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 ADGRE1Q14246 886 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 GPNMBQ14956 572 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 TRIM71Q2Q1W2 868 aaKnown RBP14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 TJAP1Q5JTD0 557 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 USP17L6PQ6QN14 398 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 SERINC5Q86VE9 423 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 PIBF1Q8WXW3 757 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 MYL10Q9BUA6 226 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 PRUNE2Q8WUY3 3088 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 CHD9Q3L8U1 2897 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 SCN5AQ14524 2016 aa14.02□□□□□ -0.17
GTF3C1-204ENST00000564664 C17orf102A2RUQ5 167 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 NBNO60934 754 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 LGALS2P05162 132 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 CA3P07451 260 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 KRT32Q14532 448 aa14.01□□□□□ -0.17
GTF3C1-204ENST00000564664 CYFIP1Q7L576 1253 aa14.01□□□□□ -0.17
Retrieved 100 of 20,778 RNA–protein pairs in 22.1 ms