RNA–Protein interactions for RNA: ENST00000564228.5

TCF4-222, Transcript of transcription factor 4, humanhuman

TSL 1 (best) BASIC

Gene TCF4, Length 1,915 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TCF4-222ENST00000564228 TSPY3P0CV98 308 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 TSPY8P0CW00 308 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 RASA1P20936 1047 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 SLC8A1P32418 973 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 LSP1P33241 339 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 SLC8A3P57103 927 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 KRT83P78385 493 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 PDCLQ13371 301 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 GSPT2Q8IYD1 628 aaKnown RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 CAGE1Q8TC20 777 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 ZNF473Q8WTR7 871 aaKnown RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 ZBED3Q96IU2 234 aaPredicted RBP12.25□□□□□ -0.45
TCF4-222ENST00000564228 GPRC5DQ9NZD1 345 aa12.25□□□□□ -0.45
TCF4-222ENST00000564228 MYH6P13533 1939 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 MYH4Q9Y623 1939 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 KRT86O43790 486 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 GRIN3BO60391 1043 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 RXRAP19793 462 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 TLDC1Q6P9B6 456 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 C6orf89Q6UWU4 347 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 PPP1R3FQ6ZSY5 799 aaPredicted RBP12.24□□□□□ -0.45
TCF4-222ENST00000564228 MICU3Q86XE3 530 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 ENAHQ8N8S7 591 aaPredicted RBP12.24□□□□□ -0.45
TCF4-222ENST00000564228 RNF25Q96BH1 459 aaPredicted RBP12.24□□□□□ -0.45
TCF4-222ENST00000564228 CSRNP1Q96S65 589 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 NUP88Q99567 741 aaPredicted RBP12.24□□□□□ -0.45
TCF4-222ENST00000564228 MYL10Q9BUA6 226 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 PI4KBQ9UBF8 816 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 HDAC6Q9UBN7 1215 aa12.24□□□□□ -0.45
TCF4-222ENST00000564228 ASTN2O75129 1339 aaPredicted RBP12.24□□□□□ -0.45
TCF4-222ENST00000564228 KRT9P35527 623 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 EPS15P42566 896 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 LIFRP42702 1097 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 MAP2K1Q02750 393 aaPredicted RBP12.23□□□□□ -0.45
TCF4-222ENST00000564228 GABPAQ06546 454 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 PTGISQ16647 500 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 CCDC122Q5T0U0 273 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 IFIT1BQ5T764 474 aaKnown RBP12.23□□□□□ -0.45
TCF4-222ENST00000564228 RCSD1Q6JBY9 416 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 APOA5Q6Q788 366 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 CD302Q8IX05 232 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 PARP9Q8IXQ6 854 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 FAM151AQ8WW52 585 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 GDAP1L1Q96MZ0 367 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 GSDMAQ96QA5 445 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 MTA3Q9BTC8 594 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 TMEM39BQ9GZU3 492 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 SRPRBQ9Y5M8 271 aaKnown RBP12.23□□□□□ -0.45
TCF4-222ENST00000564228 SLC12A7Q9Y666 1083 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 CNTNAP1P78357 1384 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ATRNL1Q5VV63 1379 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ENC1O14682 589 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ZBTB43O43298 467 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ZMYND10O75800 440 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 PPP1R37O75864 691 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 NEBLO76041 1014 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 FAM107AO95990 144 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 PRLRP16471 622 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 HERVK_113P62684 666 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ICA1Q05084 483 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 GRIK3Q13003 919 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 KRT31Q15323 416 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 SEC23AQ15436 765 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 SH3RF1Q7Z6J0 888 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 SGMS1Q86VZ5 419 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 NOSTRINQ8IVI9 506 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 P3H4Q92791 437 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 ARL8AQ96BM9 186 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 PURBQ96QR8 312 aaKnown RBP12.23□□□□□ -0.45
TCF4-222ENST00000564228 DNAJC7Q99615 494 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 SWAP70Q9UH65 585 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 CEP131Q9UPN4 1083 aa12.23□□□□□ -0.45
TCF4-222ENST00000564228 BAZ2BQ9UIF8 2168 aaKnown RBP12.22□□□□□ -0.45
TCF4-222ENST00000564228 KLHL33A6NCF5 533 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 PPP1R3GB7ZBB8 358 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 N4BP3O15049 544 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 CD44P16070 742 aaKnown RBP12.22□□□□□ -0.45
TCF4-222ENST00000564228 SHMT1P34896 483 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 TNNI2P48788 182 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 METAP2P50579 478 aaKnown RBP eCLIP12.22□□□□□ -0.45
TCF4-222ENST00000564228 COPB1P53618 953 aaKnown RBP12.22□□□□□ -0.45
TCF4-222ENST00000564228 CLNS1AP54105 237 aaKnown RBP12.22□□□□□ -0.45
TCF4-222ENST00000564228 RILPL1Q5EBL4 403 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 NLRP14Q86W24 1093 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 TMTC2Q8N394 836 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 MAB21L3Q8N8X9 362 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 OR8K1Q8NGG5 319 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 MYCBPAPQ8TBZ2 947 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 TRPM4Q8TD43 1214 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 NUP133Q8WUM0 1156 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 WASF1Q92558 559 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 SGSM3Q96HU1 749 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 CAPZA3Q96KX2 299 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 RABEP2Q9H5N1 569 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 DNAJC18Q9H819 358 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 BATF3Q9NR55 127 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 IL17RBQ9NRM6 502 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 TRIM10Q9UDY6 481 aa12.22□□□□□ -0.45
TCF4-222ENST00000564228 DDX20Q9UHI6 824 aaKnown RBP12.22□□□□□ -0.45
TCF4-222ENST00000564228 HACL1Q9UJ83 578 aa12.22□□□□□ -0.45
Retrieved 100 of 20,778 RNA–protein pairs in 27.6 ms