RNA–Protein interactions for RNA: ENST00000564047.1

SPG7-209, Transcript of SPG7, paraplegin matrix AAA peptidase subunit, humanhuman

TSL 2

Gene SPG7, Length 422 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG7-209ENST00000564047 PRPF40AO75400 957 aaKnown RBP14.61□□□□□ -0.07
SPG7-209ENST00000564047 EIF3JO75822 258 aaKnown RBP14.61□□□□□ -0.07
SPG7-209ENST00000564047 HOXC6P09630 235 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 OR52Z1P0C646 297 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 ITGB5P18084 799 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 MARCKSP29966 332 aaPredicted RBP14.61□□□□□ -0.07
SPG7-209ENST00000564047 ME1P48163 572 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 MAP2K5Q13163 448 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 KIF22Q14807 665 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 STXBP2Q15833 593 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 CALCRLQ16602 461 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 SLC9C1Q4G0N8 1177 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 PLA2G4DQ86XP0 818 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 POTEDQ86YR6 584 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 CYP2W1Q8TAV3 490 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 USP6NLQ92738 828 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 FERMT2Q96AC1 680 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 LENG9Q96B70 501 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 NUDT12Q9BQG2 462 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 TMEM60Q9H2L4 133 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 KCNMB3Q9NPA1 279 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 JADE2Q9NQC1 790 aa14.61□□□□□ -0.07
SPG7-209ENST00000564047 FBXO2Q9UK22 296 aaPredicted RBP14.61□□□□□ -0.07
SPG7-209ENST00000564047 SRPRBQ9Y5M8 271 aaKnown RBP14.61□□□□□ -0.07
SPG7-209ENST00000564047 ZNF236Q9UL36 1845 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 MAFGO15525 162 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 CUTAO60888 179 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 CTGFP29279 349 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 PSMC4P43686 418 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 PDE4DQ08499 809 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 CHRDL2Q6WN34 429 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 NLRX1Q86UT6 975 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 SLFN12Q8IYM2 578 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 MSL3Q8N5Y2 521 aaKnown RBP14.6□□□□□ -0.07
SPG7-209ENST00000564047 KRI1Q8N9T8 703 aaKnown RBP14.6□□□□□ -0.07
SPG7-209ENST00000564047 GPRASP2Q96D09 838 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 FAM20AQ96MK3 541 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 INPP4AQ96PE3 977 aaPredicted RBP14.6□□□□□ -0.07
SPG7-209ENST00000564047 LMBRD1Q9NUN5 540 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 GJD2Q9UKL4 321 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 PCDHA7Q9UN72 937 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 MRVI1Q9Y6F6 885 aa14.6□□□□□ -0.07
SPG7-209ENST00000564047 MSH4O15457 936 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 MARCH6O60337 910 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 RGS2P41220 211 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 MTMR1Q13613 665 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 GNPTABQ3T906 1256 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 AXDND1Q5T1B0 1012 aaPredicted RBP14.59□□□□□ -0.07
SPG7-209ENST00000564047 ADALQ6DHV7 355 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 MAMDC4Q6UXC1 1216 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 DTHD1Q6ZMT9 781 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 ZNF579Q8NAF0 562 aaKnown RBP14.59□□□□□ -0.07
SPG7-209ENST00000564047 ETNPPLQ8TBG4 499 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 HAS1Q92839 578 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 MAML3Q96JK9 1138 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 ZFP91Q96JP5 570 aaPredicted RBP14.59□□□□□ -0.07
SPG7-209ENST00000564047 CDHR1Q96JP9 859 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 TRIM47Q96LD4 638 aa14.59□□□□□ -0.07
SPG7-209ENST00000564047 PLXNB2O15031 1838 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 A0A1W2PQ27 194 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 A0A1W2PQ64 194 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 A0A1W2PQD8 194 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 GOLGA6L4A6NEF3 574 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 TRAK2O60296 914 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 RGS20O76081 388 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 ECM2O94769 699 aaPredicted RBP14.58□□□□□ -0.08
SPG7-209ENST00000564047 ARP10275 920 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 ICAM3P32942 547 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 UBE2HP62256 183 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 IL17AQ16552 155 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 L1TD1Q5T7N2 865 aaKnown RBP14.58□□□□□ -0.08
SPG7-209ENST00000564047 NPLOC4Q8TAT6 608 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 WDR11Q9BZH6 1224 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 ARHGAP39Q9C0H5 1083 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 KCNH7Q9NS40 1196 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 MYH7BA7E2Y1 1941 aa14.58□□□□□ -0.08
SPG7-209ENST00000564047 LCTP09848 1927 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 VWA3AA6NCI4 1184 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 SPATA31C2B4DYI2 1134 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 GADD45BO75293 160 aaPredicted RBP14.57□□□□□ -0.08
SPG7-209ENST00000564047 GNRH1P01148 92 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 LONP1P36776 959 aaKnown RBP14.57□□□□□ -0.08
SPG7-209ENST00000564047 TXKP42681 527 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 FXR2P51116 673 aaKnown RBP eCLIP14.57□□□□□ -0.08
SPG7-209ENST00000564047 TMEM266Q2M3C6 531 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 ARMCX2Q7L311 632 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 SLC5A5Q92911 643 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 RIT2Q99578 217 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 APBA2Q99767 749 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 ZNF577Q9BSK1 485 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 TTC12Q9H892 705 aaPredicted RBP14.57□□□□□ -0.08
SPG7-209ENST00000564047 AGO4Q9HCK5 861 aaKnown RBP14.57□□□□□ -0.08
SPG7-209ENST00000564047 PCDHA12Q9UN75 941 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 DDX49Q9Y6V7 483 aaKnown RBP14.57□□□□□ -0.08
SPG7-209ENST00000564047 SYNGAP1Q96PV0 1343 aa14.57□□□□□ -0.08
SPG7-209ENST00000564047 UNC80Q8N2C7 3258 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 IPO5O00410 1097 aaKnown RBP14.56□□□□□ -0.08
SPG7-209ENST00000564047 XRCC5P13010 732 aaKnown RBP14.56□□□□□ -0.08
SPG7-209ENST00000564047 CYP2B6P20813 491 aa14.56□□□□□ -0.08
SPG7-209ENST00000564047 CMA1P23946 247 aa14.56□□□□□ -0.08
Retrieved 100 of 20,778 RNA–protein pairs in 21 ms