RNA–Protein interactions for RNA: ENST00000563917.2

CLN6-203, Transcript of CLN6, transmembrane ER protein, humanhuman

TSL 5

Gene CLN6, Length 557 nt, Biotype processed transcript, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLN6-203ENST00000563917 MCM5P33992 734 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 TROAPQ12815 778 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 PTK7Q13308 1070 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 NEDD9Q14511 834 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 MYSM1Q5VVJ2 828 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 CNKSR3Q6P9H4 555 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 SYNE3Q6ZMZ3 975 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 HERC6Q8IVU3 1022 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 MICALL1Q8N3F8 863 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 KAT2BQ92831 832 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 MAP4K1Q92918 833 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 TMEM87BQ96K49 555 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 MTA3Q9BTC8 594 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 RBM8AQ9Y5S9 174 aaKnown RBP11.03□□□□□ -0.64
CLN6-203ENST00000563917 MYO9BQ13459 2157 aa11.03□□□□□ -0.64
CLN6-203ENST00000563917 ABHD14A-ACY1A0A1B0GW23 586 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 OPLAHO14841 1288 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 PRC1O43663 620 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 GNAT1P11488 350 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 CKBP12277 381 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 MYOGP15173 224 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 UBA1P22314 1058 aaKnown RBP11.02□□□□□ -0.65
CLN6-203ENST00000563917 MRPS5P82675 430 aaKnown RBP11.02□□□□□ -0.65
CLN6-203ENST00000563917 IKBKEQ14164 716 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 AAK1Q2M2I8 961 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 RNF20Q5VTR2 975 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 XRRA1Q6P2D8 792 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 NLRX1Q86UT6 975 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 ZNF654Q8IZM8 581 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 USP38Q8NB14 1042 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 SPZ1Q9BXG8 430 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 USP26Q9BXU7 913 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 ZNF215Q9UL58 517 aaPredicted RBP11.02□□□□□ -0.65
CLN6-203ENST00000563917 EMSYQ7Z589 1322 aa11.02□□□□□ -0.65
CLN6-203ENST00000563917 C17orf102A2RUQ5 167 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 H3BRB1 525 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 HAS3O00219 553 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 FIBPO43427 364 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 SMARCA1P28370 1054 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 RBL2Q08999 1139 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 ADGRE1Q14246 886 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 HSDL1Q3SXM5 330 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 MB21D2Q8IYB1 491 aaPredicted RBP11.01□□□□□ -0.65
CLN6-203ENST00000563917 GIMAP8Q8ND71 665 aaPredicted RBP11.01□□□□□ -0.65
CLN6-203ENST00000563917 IGDCC4Q8TDY8 1250 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 ARNTL2Q8WYA1 636 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 ATP6V0A1Q93050 837 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 CDHR1Q96JP9 859 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 TUT1Q9H6E5 874 aaKnown RBP11.01□□□□□ -0.65
CLN6-203ENST00000563917 EHMT1Q9H9B1 1298 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 CERS4Q9HA82 394 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 ANO2Q9NQ90 1003 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 SLC12A7Q9Y666 1083 aa11.01□□□□□ -0.65
CLN6-203ENST00000563917 LAMA2P24043 3122 aaKnown RBP11.01□□□□□ -0.65
CLN6-203ENST00000563917 GBF1Q92538 1859 aa11□□□□□ -0.65
CLN6-203ENST00000563917 TANC1Q9C0D5 1861 aa11□□□□□ -0.65
CLN6-203ENST00000563917 MYH7BA7E2Y1 1941 aa11□□□□□ -0.65
CLN6-203ENST00000563917 SPDYE3A6NKU9 549 aa11□□□□□ -0.65
CLN6-203ENST00000563917 RSPH10B2B2RC85 870 aa11□□□□□ -0.65
CLN6-203ENST00000563917 CYTH3O43739 400 aa11□□□□□ -0.65
CLN6-203ENST00000563917 RGS20O76081 388 aa11□□□□□ -0.65
CLN6-203ENST00000563917 RSPH10BP0C881 870 aa11□□□□□ -0.65
CLN6-203ENST00000563917 HOXD8P13378 290 aaPredicted RBP11□□□□□ -0.65
CLN6-203ENST00000563917 THPOP40225 353 aa11□□□□□ -0.65
CLN6-203ENST00000563917 WDR5P61964 334 aaKnown RBP11□□□□□ -0.65
CLN6-203ENST00000563917 METTL7BQ6UX53 244 aa11□□□□□ -0.65
CLN6-203ENST00000563917 IL31RAQ8NI17 732 aa11□□□□□ -0.65
CLN6-203ENST00000563917 ZFP91Q96JP5 570 aaPredicted RBP11□□□□□ -0.65
CLN6-203ENST00000563917 ASB2Q96Q27 587 aa11□□□□□ -0.65
CLN6-203ENST00000563917 PSTPIP2Q9H939 334 aa11□□□□□ -0.65
CLN6-203ENST00000563917 LY9Q9HBG7 655 aa11□□□□□ -0.65
CLN6-203ENST00000563917 SENP2Q9HC62 589 aa11□□□□□ -0.65
CLN6-203ENST00000563917 RTEL1Q9NZ71 1219 aa11□□□□□ -0.65
CLN6-203ENST00000563917 SCN5AQ14524 2016 aa11□□□□□ -0.65
CLN6-203ENST00000563917 SPATA31C2B4DYI2 1134 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 LGR5O75473 907 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 CXCL10P02778 98 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 AMHP03971 560 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 ICAM3P32942 547 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 LIFRP42702 1097 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 ANTXR2P58335 489 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 SP2Q02086 613 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 ZNF618Q5T7W0 954 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 PCNX4Q63HM2 1172 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 CYFIP1Q7L576 1253 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 DHX38Q92620 1227 aaKnown RBP10.99□□□□□ -0.65
CLN6-203ENST00000563917 VWCEQ96DN2 955 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 INPP4AQ96PE3 977 aaPredicted RBP10.99□□□□□ -0.65
CLN6-203ENST00000563917 RAD9AQ99638 391 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 MYL10Q9BUA6 226 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 PRDM6Q9NQX0 595 aa10.99□□□□□ -0.65
CLN6-203ENST00000563917 TRIP12Q14669 1992 aaPredicted RBP10.99□□□□□ -0.65
CLN6-203ENST00000563917 BAZ2BQ9UIF8 2168 aaKnown RBP10.99□□□□□ -0.65
CLN6-203ENST00000563917 TNFRSF10AO00220 468 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 PIK3CDO00329 1044 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 SH2B2O14492 632 aaPredicted RBP10.98□□□□□ -0.65
CLN6-203ENST00000563917 SLC27A2O14975 620 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 NBNO60934 754 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 CAND2O75155 1236 aa10.98□□□□□ -0.65
CLN6-203ENST00000563917 LGALS2P05162 132 aa10.98□□□□□ -0.65
Retrieved 100 of 20,778 RNA–protein pairs in 21.8 ms