RNA–Protein interactions for RNA: ENST00000563662.2

VAC14-204, Transcript of Vac14, PIKFYVE complex component, humanhuman

TSL 3

Gene VAC14, Length 554 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAC14-204ENST00000563662 NEDD9Q14511 834 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 NLRX1Q86UT6 975 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 C7orf31Q8N865 590 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 GIMAP8Q8ND71 665 aaPredicted RBP11.59□□□□□ -0.55
VAC14-204ENST00000563662 COPS5Q92905 334 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 CDHR1Q96JP9 859 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 PPP1R12CQ9BZL4 782 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 GLT8D2Q9H1C3 349 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 TRPV6Q9H1D0 765 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 EHMT1Q9H9B1 1298 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 MLXIPQ9HAP2 919 aa11.59□□□□□ -0.55
VAC14-204ENST00000563662 MAFGO15525 162 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 ZBTB43O43298 467 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 B4GALT4O60513 344 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 EIF5BO60841 1220 aaKnown RBP11.58□□□□□ -0.56
VAC14-204ENST00000563662 ARIH2O95376 493 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 MMP3P08254 477 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 CSF2RAP15509 400 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 ARHGAP1Q07960 439 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 CELF3Q5SZQ8 465 aaKnown RBP11.58□□□□□ -0.56
VAC14-204ENST00000563662 SESTD1Q86VW0 696 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 SRBD1Q8N5C6 995 aaKnown RBP11.58□□□□□ -0.56
VAC14-204ENST00000563662 PIBF1Q8WXW3 757 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 SLC39A7Q92504 469 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 SPATA33Q96N06 139 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 MYL10Q9BUA6 226 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 NOC4LQ9BVI4 516 aaKnown RBP11.58□□□□□ -0.56
VAC14-204ENST00000563662 MTMR10Q9NXD2 777 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 STXBP5LQ9Y2K9 1186 aa11.58□□□□□ -0.56
VAC14-204ENST00000563662 COL11A1P12107 1806 aaPredicted RBP11.58□□□□□ -0.56
VAC14-204ENST00000563662 DNAH12Q6ZR08 3092 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 SPDYE3A6NKU9 549 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 hCG_1984214I3L0E3 225 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 FIBPO43427 364 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 SEC24BO95487 1268 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 ACTN1P12814 892 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 PTGS1P23219 599 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 ICAM3P32942 547 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 CYP2C18P33260 490 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 EPHB4P54760 987 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 RTN1Q16799 776 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 SLC35G1Q2M3R5 365 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 TMEM240Q5SV17 173 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 MYSM1Q5VVJ2 828 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 TMTC3Q6ZXV5 915 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 ZNF365Q70YC5 407 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 MICU3Q86XE3 530 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 ZNF713Q8N859 430 aaPredicted RBP11.57□□□□□ -0.56
VAC14-204ENST00000563662 PDCD7Q8N8D1 485 aaKnown RBP11.57□□□□□ -0.56
VAC14-204ENST00000563662 CAGE1Q8TC20 777 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 HERVK_113Q902F9 699 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 SENP7Q9BQF6 1050 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 BUD13Q9BRD0 619 aaKnown RBP eCLIP11.57□□□□□ -0.56
VAC14-204ENST00000563662 USP26Q9BXU7 913 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 TRMT13Q9NUP7 481 aaKnown RBP11.57□□□□□ -0.56
VAC14-204ENST00000563662 LAMA3Q16787 3333 aa11.57□□□□□ -0.56
VAC14-204ENST00000563662 SPATA31C2B4DYI2 1134 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 NOP56O00567 594 aaKnown RBP11.56□□□□□ -0.56
VAC14-204ENST00000563662 PLEKHA8P1O95397 391 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 GGPS1O95749 300 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 FOSP01100 380 aaPredicted RBP11.56□□□□□ -0.56
VAC14-204ENST00000563662 GNAT1P11488 350 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 CCL23P55773 120 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 CHMP4BP1P59074 171 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 RAB30Q15771 203 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 PTGISQ16647 500 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 PCNX4Q63HM2 1172 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 MCTP2Q6DN12 878 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 PPP1R18Q6NYC8 613 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 APOA5Q6Q788 366 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 BLOC1S2Q6QNY1 142 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 CCDC82Q8N4S0 544 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 KCNB2Q92953 911 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 INPP4AQ96PE3 977 aaPredicted RBP11.56□□□□□ -0.56
VAC14-204ENST00000563662 LRRC2Q9BYS8 371 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 SEMA6BQ9H3T3 888 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 OCEL1Q9H607 264 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 MSRAQ9UJ68 235 aa11.56□□□□□ -0.56
VAC14-204ENST00000563662 ZNFX1Q9P2E3 1918 aaKnown RBP11.55□□□□□ -0.56
VAC14-204ENST00000563662 MEIS2O14770 477 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 RGS20O76081 388 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 F2P00734 622 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 HOXD8P13378 290 aaPredicted RBP11.55□□□□□ -0.56
VAC14-204ENST00000563662 RXRAP19793 462 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 HSPA4P34932 840 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 PSEN2P49810 448 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 KIAA0753Q2KHM9 967 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 RASIP1Q5U651 963 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 USP17L6PQ6QN14 398 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 METTL7BQ6UX53 244 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 C16orf59Q7L2K0 433 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 HEATR3Q7Z4Q2 680 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 FBXL16Q8N461 479 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 AFAP1L1Q8TED9 768 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 CCDC12Q8WUD4 166 aaPredicted RBP11.55□□□□□ -0.56
VAC14-204ENST00000563662 TNPO1Q92973 898 aaKnown RBP11.55□□□□□ -0.56
VAC14-204ENST00000563662 PPP4R2Q9NY27 417 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 METRNQ9UJH8 293 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 FRMPD4Q14CM0 1322 aa11.55□□□□□ -0.56
VAC14-204ENST00000563662 KLF18A0A0U1RQI7 1052 aa11.54□□□□□ -0.56
Retrieved 100 of 20,778 RNA–protein pairs in 21.7 ms