RNA–Protein interactions for RNA: ENST00000563512.1

NSMCE1-205, Transcript of NSE1 homolog, SMC5-SMC6 complex component, humanhuman

TSL 4

Gene NSMCE1, Length 552 nt, Biotype processed transcript, Subcellular localisation Cytosol, Exosome, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NSMCE1-205ENST00000563512 HOMEZQ8IX15 550 aa9.8□□□□□ -0.84
NSMCE1-205ENST00000563512 CNTROBQ8N137 903 aa9.8□□□□□ -0.84
NSMCE1-205ENST00000563512 WDR66Q8TBY9 1149 aa9.8□□□□□ -0.84
NSMCE1-205ENST00000563512 DUSP9Q99956 384 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-205ENST00000563512 CCDC86Q9H6F5 360 aaKnown RBP9.8□□□□□ -0.84
NSMCE1-205ENST00000563512 SIPA1L1O43166 1804 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 CASP8AP2Q9UKL3 1982 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 FAM95CA0A1B0GW59 222 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 SHTN1A0MZ66 631 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 IGSF3O75054 1194 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 FRAT2O75474 233 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 SURF6O75683 361 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 LIG1P18858 919 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 NME2P22392 152 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 ARNTP27540 789 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 OS9Q13438 667 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 NFKBIBQ15653 356 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 TBC1D10BQ4KMP7 808 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 MAP1SQ66K74 1059 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 PAOXQ6QHF9 649 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 DNAJC14Q6Y2X3 702 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 KIAA0825Q8IV33 1275 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 ZGPATQ8N5A5 531 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 CERS5Q8N5B7 392 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 FBLIM1Q8WUP2 373 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 DCPSQ96C86 337 aaKnown RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 ZBED3Q96IU2 234 aaPredicted RBP9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 GGA3Q9NZ52 723 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 DENND2AQ9ULE3 1009 aa9.79□□□□□ -0.84
NSMCE1-205ENST00000563512 MYO1BO43795 1136 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 FBXO24O75426 580 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 ERCC3P19447 782 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 TFCP2Q12800 502 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 NPAS4Q8IUM7 802 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 APOBEC3FQ8IUX4 373 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 GIMAP7Q8NHV1 300 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 NECAB3Q96P71 396 aaPredicted RBP9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 DBNDD2Q9BQY9 259 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 WDR18Q9BV38 432 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 MRIQ9BWK5 157 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 KRT82Q9NSB4 513 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 TTF2Q9UNY4 1162 aaKnown RBP9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 ACTL7BQ9Y614 415 aa9.78□□□□□ -0.84
NSMCE1-205ENST00000563512 RPAP1Q9BWH6 1393 aaPredicted RBP9.77□□□□□ -0.84
NSMCE1-205ENST00000563512 WNT10BO00744 389 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 RAB6AP20340 208 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 ASPAP45381 313 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 DLGAP5Q15398 846 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 TNNI3KQ59H18 835 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 C20orf194Q5TEA3 1177 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 CDPF1Q6NVV7 123 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 KRT26Q7Z3Y9 468 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 ZNF512BQ96KM6 892 aaPredicted RBP9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 RNF112Q9ULX5 631 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 PPP2R3BQ9Y5P8 575 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 FPGT-TNNI3KV9GXZ4 949 aa9.77□□□□□ -0.85
NSMCE1-205ENST00000563512 CNTNAP1P78357 1384 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 RAB11FIP3O75154 756 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 UQCRFS1P1P0C7P4 283 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 PHKA1P46020 1223 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 FKBP1BP68106 108 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 TNFAIP1Q13829 316 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 RASGRF1Q13972 1273 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 ANGEL2Q5VTE6 544 aaKnown RBP9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 TMED8Q6PL24 325 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 HHIPL2Q6UWX4 724 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 TEKT1Q969V4 418 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 KIF1BPQ96EK5 621 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 HHIPL1Q96JK4 782 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 MXD3Q9BW11 206 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 GLIS2Q9BZE0 524 aaPredicted RBP9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 AK5Q9Y6K8 562 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 SYNGAP1Q96PV0 1343 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 MYH4Q9Y623 1939 aa9.76□□□□□ -0.85
NSMCE1-205ENST00000563512 MGAMO43451 1857 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 RASSF10A6NK89 507 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 ADORA1P30542 326 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 TIMM10P62072 90 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 CHAF1AQ13111 956 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 PSMD2Q13200 908 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 MAP7Q14244 749 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 NBPF9Q3BBW0 867 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 CCDC158Q5M9N0 1113 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 GORABQ5T7V8 394 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 SPTY2D1Q68D10 685 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 SIRT2Q8IXJ6 389 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 WDR89Q96FK6 387 aaPredicted RBP9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 MFSD14AQ96MC6 490 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 NEUROD6Q96NK8 337 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 PIDD1Q9HB75 910 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 EXOC6BQ9Y2D4 811 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 LAMA4Q16363 1823 aa9.75□□□□□ -0.85
NSMCE1-205ENST00000563512 COL2A1P02458 1487 aaPredicted RBP9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 DOCK3Q8IZD9 2030 aa9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 ENC1O14682 589 aa9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 CRKP46108 304 aa9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 ID3Q02535 119 aa9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 LRRC14Q15048 493 aa9.74□□□□□ -0.85
NSMCE1-205ENST00000563512 CFAP100Q494V2 611 aa9.74□□□□□ -0.85
Retrieved 100 of 20,778 RNA–protein pairs in 21.9 ms